RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 TMEM17Q86X19 198 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 OR56B4Q8NH76 319 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 SEH1LQ96EE3 360 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 MEGF10Q96KG7 1140 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 DIRC2Q96SL1 478 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 SPOCK3Q9BQ16 436 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 NICN1Q9BSH3 213 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 GPN1Q9HCN4 374 aaPredicted RBP7.21□□□□□ -1.26
VAPB-206ENST00000520497 PLEKHJ1Q9NW61 149 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 KLK11Q9UBX7 282 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 IL19Q9UHD0 177 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 GLS2Q9UI32 602 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 HSF4Q9ULV5 492 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 ANKRD17O75179 2603 aaKnown RBP7.21□□□□□ -1.26
VAPB-206ENST00000520497 UNC79Q9P2D8 2635 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 CENPEQ02224 2701 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 MEIOCA2RUB1 952 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 A6NNC1 897 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 F8VVB4 439 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 F8VWA3 439 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 MFNGO00587 321 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 CDIPTO14735 213 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 HS3ST1O14792 307 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 SOCS1O15524 211 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 TCRBP04435 133 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 HNRNPCP07910 306 aaKnown RBP eCLIP7.2□□□□□ -1.26
VAPB-206ENST00000520497 H2AFB2P0C5Z0 115 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 TRAPPC2P0DI81 140 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 TRAPPC2BP0DI82 140 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 GNB3P16520 340 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 GIFP27352 417 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 CFHR2P36980 270 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 PMELP40967 661 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 OR3A3P47888 321 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 SRP9P49458 86 aaKnown RBP7.2□□□□□ -1.26
VAPB-206ENST00000520497 RBM11P57052 281 aaKnown RBP7.2□□□□□ -1.26
VAPB-206ENST00000520497 RAB25P57735 213 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 FGF12P61328 243 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 TNFAIP6P98066 277 aaPredicted RBP7.2□□□□□ -1.26
VAPB-206ENST00000520497 GUCA2AQ02747 115 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 IL13RA2Q14627 380 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 MPPED2Q15777 294 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 PLA1AQ53H76 456 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 FAM209AQ5JX71 171 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 NKAPLQ5M9Q1 402 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 AGAP6Q5VW22 663 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 WDR82Q6UXN9 313 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 AKAP14Q86UN6 197 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 FBXL14Q8N1E6 418 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 MUC15Q8N387 334 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 POC1AQ8NBT0 407 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 OR10Z1Q8NGY1 313 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 CCDC107Q8WV48 283 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 ITLN1Q8WWA0 313 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 GCDHQ92947 438 aaPredicted RBP7.2□□□□□ -1.26
VAPB-206ENST00000520497 FBXW5Q969U6 566 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 DACT3Q96B18 629 aaPredicted RBP7.2□□□□□ -1.26
VAPB-206ENST00000520497 ARHGAP5-AS1Q96IT6 56 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 OR2V2Q96R30 315 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 PRRT1Q99946 306 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 NRIP2Q9BQI9 281 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 SLC25A21Q9BQT8 299 aaPredicted RBP7.2□□□□□ -1.26
VAPB-206ENST00000520497 MARVELD1Q9BSK0 173 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 PECRQ9BY49 303 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 CHST6Q9GZX3 395 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 MMP28Q9H239 520 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 HES4Q9HCC6 221 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 NUDT15Q9NV35 164 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 EDARQ9UNE0 448 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 ST3GAL6Q9Y274 331 aa7.2□□□□□ -1.26
VAPB-206ENST00000520497 YLPM1P49750 1951 aaKnown RBP7.2□□□□□ -1.26
VAPB-206ENST00000520497 IGHV3-64DA0A0J9YX35 117 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 MEIS3P1A6NDR6 274 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 SRRM5B3KS81 715 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 SPRY3O43610 288 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 PDCD6O75340 191 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 PEX14O75381 377 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 AMY2AP04746 511 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 GLAP06280 429 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 GRPP07492 148 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 DANCRP0C864 163 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 AMY2BP19961 511 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 FUT3P21217 361 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 TNFSF4P23510 183 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 HLA-DMAP28067 261 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 PPOXP50336 477 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 TMEM50BP56557 158 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 RBM39Q14498 530 aaKnown RBP7.19□□□□□ -1.26
VAPB-206ENST00000520497 PIGYQ3MUY2 71 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 PLAC9Q5JTB6 97 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 SIGIRRQ6IA17 410 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 C11orf71Q6IPW1 123 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 ZNF826PQ6ZT77 177 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 DTX2Q86UW9 622 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 FAM58AQ8N1B3 248 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 OR4C16Q8NGL9 310 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 OR5H2Q8NGV7 314 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 Q8TCH9 128 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 NEK7Q8TDX7 302 aa7.19□□□□□ -1.26
VAPB-206ENST00000520497 CHAC2Q8WUX2 184 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms