RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 FAM90A12PA8MX19 464 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 FAM90A5PA8MXJ8 464 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 FAM90A23PA8MXZ1 464 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 TRAPPC2LH3BP13 241 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 LYZL6O75951 148 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 FAM90A15PP0C7V4 464 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 FAM90A13PP0C7W8 464 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 FAM90A14PP0C7W9 464 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 FAM90A24PP0C7X0 464 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 ZNF14P17017 642 aaPredicted RBP11.14□□□□□ -0.63
SEC13-216ENST00000479868 DUSP1P28562 367 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 PMELP40967 661 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 TCF15Q12870 199 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 IL15RAQ13261 267 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 RAB32Q13637 225 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 HAGHLQ6PII5 290 aaPredicted RBP11.14□□□□□ -0.63
SEC13-216ENST00000479868 C5orf24Q7Z6I8 188 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 C2orf50Q96LR7 162 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 ZNF488Q96MN9 340 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 HIST1H2AAQ96QV6 131 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 GSKIPQ9P0R6 139 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 ZFHX2Q9C0A1 2572 aaPredicted RBP11.14□□□□□ -0.63
SEC13-216ENST00000479868 HSPB6O14558 160 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 CA6P23280 308 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 RBM39Q14498 530 aaKnown RBP11.13□□□□□ -0.63
SEC13-216ENST00000479868 DEFB109BQ30KR1 87 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 IGSF11Q5DX21 431 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 UNQ6126/PRO20091Q6UXV3 157 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 PDZD9Q8IXQ8 264 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 MKXQ8IYA7 352 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 DHRS9Q9BPW9 319 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 MED9Q9NWA0 146 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 SVILO95425 2214 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 TRAV17A0A0B4J275 112 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 MSGN1A6NI15 193 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 F5H0A9 414 aaPredicted RBP11.13□□□□□ -0.63
SEC13-216ENST00000479868 TSC22D1Q15714 1073 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 TBC1D28Q2M2D7 210 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 SP6Q3SY56 376 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 PLEKHN1Q494U1 663 aaPredicted RBP11.13□□□□□ -0.63
SEC13-216ENST00000479868 FAM214BQ7L5A3 538 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 OR5L1Q8NGL2 311 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 RASL12Q9NYN1 266 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 RCC2Q9P258 522 aaKnown RBP11.13□□□□□ -0.63
SEC13-216ENST00000479868 MPC1Q9Y5U8 109 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 PRR14LQ5THK1 2151 aa11.13□□□□□ -0.63
SEC13-216ENST00000479868 CACNA1GO43497 2377 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 SHOXO15266 292 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 LYL1P12980 280 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 PRKACAP17612 351 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 IDH3GP51553 393 aaPredicted RBP11.12□□□□□ -0.63
SEC13-216ENST00000479868 GUSBP1Q15486 140 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 ABCA11PQ4W5N1 156 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 PHLDA2Q53GA4 152 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 PRSS54Q6PEW0 395 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 IGF2-ASQ6U949 168 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 RTN4IP1Q8WWV3 396 aaPredicted RBP11.12□□□□□ -0.63
SEC13-216ENST00000479868 MOB3AQ96BX8 217 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 CCDC120Q96HB5 630 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 SLC25A32Q9H2D1 315 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 SLC2A9Q9NRM0 540 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 GLRX2Q9NS18 164 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 KCNMB2Q9Y691 235 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 PRSS47A8MTI9 375 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 NAPSAO96009 420 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 OR5AC1P0C628 307 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 AADACP22760 399 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 NUBP1P53384 320 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 S100A10P60903 97 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 ERVS71-1P61550 626 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 IAH1Q2TAA2 248 aaPredicted RBP11.12□□□□□ -0.63
SEC13-216ENST00000479868 CNEP1R1Q8N9A8 125 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 OR11L1Q8NGX0 322 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 MRPL24Q96A35 216 aaKnown RBP11.12□□□□□ -0.63
SEC13-216ENST00000479868 PIK3IP1Q96FE7 263 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 NAA60Q9H7X0 242 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 AKAP13Q12802 2813 aa11.12□□□□□ -0.63
SEC13-216ENST00000479868 AQP7O14520 342 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 SMPD2O60906 423 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 RHBDL1O75783 438 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 GLI4P10075 376 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 UBE2NP61088 152 aaKnown RBP11.11□□□□□ -0.63
SEC13-216ENST00000479868 GNG3P63215 75 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 TGFBR3Q03167 851 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 MPV17LQ2QL34 196 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 GGNBP1Q5YKI7 109 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 ZNF573Q86YE8 665 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 FOXRED2Q8IWF2 684 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 C17orf78Q8N4C9 275 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 OR5T2Q8NGG2 359 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 OR2J1Q9GZK6 312 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 PFDN2Q9UHV9 154 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 LHX6Q9UPM6 363 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 OR5B21A6NL26 309 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 GLP1RP43220 463 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 TMEM187Q14656 261 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 GABRA6Q16445 453 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 VWA1Q6PCB0 445 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 FBXW12Q6X9E4 464 aa11.11□□□□□ -0.63
SEC13-216ENST00000479868 Q6ZT83 130 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms