RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 VSNL1P62760 191 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 ATP5G2Q06055 141 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 COQ5Q5HYK3 327 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 ZFAND6Q6FIF0 208 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 FAHD1Q6P587 224 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 SSX6Q7RTT6 188 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 SETD3Q86TU7 594 aaPredicted RBP2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 STX12Q86Y82 276 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 ZNF738Q8NE65 137 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 OR2M4Q96R27 311 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 SEC22CQ9BRL7 303 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 MS4A8Q9BY19 250 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 MRPL20Q9BYC9 149 aaKnown RBP2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 PARD6GQ9BYG4 376 aaPredicted RBP2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 COA1Q9GZY4 146 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 DHX35Q9H5Z1 703 aaKnown RBP2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 WDR55Q9H6Y2 383 aaPredicted RBP2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 CA10Q9NS85 328 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 MAT2BQ9NZL9 334 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 PRO0628Q9UI54 55 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 ORC6Q9Y5N6 252 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 GOLGA6L4A6NEF3 574 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 PLPP3O14495 311 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 GPR171O14626 319 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 TCAPO15273 167 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 AQP9O43315 295 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 ALOX12BO75342 701 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 ZNF189O75820 626 aaPredicted RBP2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 GP1BAP07359 652 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 PFN1P07737 140 aaKnown RBP2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 MLNP12872 115 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 PAX6P26367 422 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 MAGEA6P43360 314 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 RPL14P50914 215 aaKnown RBP2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 CEBPGP53567 150 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 PRKCDQ05655 676 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 STX5Q13190 355 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 IL15RAQ13261 267 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 BIKQ13323 160 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 TOMM34Q15785 309 aaPredicted RBP2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 TBPL2Q6SJ96 375 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 EPGNQ6UW88 154 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 SSX7Q7RTT5 188 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 DAZ4Q86SG3 579 aaKnown RBP2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 NT5DC3Q86UY8 548 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 BOD1L2Q8IYS8 172 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 CA13Q8N1Q1 262 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 C1orf64Q8NEQ6 169 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 OR2Y1Q8NGV0 311 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 ZNF420Q8TAQ5 688 aaPredicted RBP2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 NT5CQ8TCD5 201 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 PHOSPHO2Q8TCD6 241 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 RORBQ92753 470 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 PPP1R14BQ96C90 147 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 UTP23Q9BRU9 249 aaKnown RBP2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 ZNF426Q9BUY5 554 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 DAZ1Q9NQZ3 744 aaKnown RBP2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 VAPAQ9P0L0 249 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 AP3M1Q9Y2T2 418 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 COL27A1Q8IZC6 1860 aaPredicted RBP2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 ELP1O95163 1332 aa2.39□□□□□ -2.03
SMNDC1-205ENST00000477763 TRAV8-7A0A075B6U6 113 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 GOLGA6L19H0YKK7 550 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 M0QXV9 152 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 SGCEO43556 437 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 DEXIO95424 95 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 NSA2O95478 260 aaKnown RBP2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 NRASP01111 189 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 HRASP01112 189 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 KRASP01116 189 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 IGHV1-46P01743 117 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 RD3LP0DJH9 198 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 TGFBR1P36897 503 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 PPP1R2P41236 205 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 ACTR1BP42025 376 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 RANBP1P43487 201 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 XKP51811 444 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 RPL10AP62906 217 aaKnown RBP2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 C2orf80Q0P641 193 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 PMVKQ15126 192 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 SNCBQ16143 134 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 TAL2Q16559 108 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 DNAL1Q4LDG9 190 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 ZNF678Q5SXM1 525 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 SYT6Q5T7P8 510 aaPredicted RBP2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 RESP18Q5W5W9 173 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 FAM104BQ5XKR9 115 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 PPP1R2P3Q6NXS1 205 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 TMEM25Q86YD3 366 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 ITPRIPQ8IWB1 547 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 DNAJB3Q8WWF6 145 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 OTUB2Q96DC9 234 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 SMIM8Q96KF7 97 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 ZNF75AQ96N20 296 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 DERL3Q96Q80 235 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 METTL26Q96S19 204 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 C20orf144Q9BQM9 153 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 DCUN1D5Q9BTE7 237 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 CHRNA10Q9GZZ6 450 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 PORCNQ9H237 461 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms