RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 MGLLQ99685 303 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 HMG20AQ9NP66 347 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 ISYNA1Q9NPH2 558 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 TMEM138Q9NPI0 162 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 GLS2Q9UI32 602 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 NUP50Q9UKX7 468 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 FOXJ3Q9UPW0 622 aa8.32□□□□□ -1.08
RFX3-210ENST00000457373 MAP1AP78559 2803 aaPredicted RBP8.32□□□□□ -1.08
RFX3-210ENST00000457373 TLN2Q9Y4G6 2542 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 TRAV40A0A0B4J280 105 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 MAGEA13PA6NCF6 341 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 SIRPB1O00241 398 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 SH2D1BO14796 132 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 CDRT1O95170 752 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 FSHBP01225 129 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 IGHV4-38-2P0DP08 117 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 FSTP19883 344 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 GABRR1P24046 479 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 FPR2P25090 351 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 MAPK3P27361 379 aaPredicted RBP8.31□□□□□ -1.08
RFX3-210ENST00000457373 RPS25P62851 125 aaKnown RBP8.31□□□□□ -1.08
RFX3-210ENST00000457373 EMX1Q04741 257 aaPredicted RBP8.31□□□□□ -1.08
RFX3-210ENST00000457373 MLLT11Q13015 90 aaPredicted RBP8.31□□□□□ -1.08
RFX3-210ENST00000457373 GPR50Q13585 617 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 TPBGQ13641 420 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 RSU1Q15404 277 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 UNQ9370/PRO34162Q6UXP9 181 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 CEACAM19Q7Z692 300 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 JAGN1Q8N5M9 183 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 PXT1Q8NFP0 134 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 C8orf46Q8TAG6 207 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 LHX4Q969G2 390 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 UPRTQ96BW1 309 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 SNX22Q96L94 193 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 TBX15Q96SF7 602 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 YTHDF1Q9BYJ9 559 aaKnown RBP8.31□□□□□ -1.08
RFX3-210ENST00000457373 MS4A7Q9GZW8 240 aaPredicted RBP8.31□□□□□ -1.08
RFX3-210ENST00000457373 SIRPDQ9H106 197 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 METTL9Q9H1A3 318 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 TCF7L1Q9HCS4 588 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 EXOSC4Q9NPD3 245 aaKnown RBP8.31□□□□□ -1.08
RFX3-210ENST00000457373 ACOT13Q9NPJ3 140 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 C19orf12Q9NSK7 152 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 ZNF69Q9UC07 566 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 LRRC42Q9Y546 428 aa8.31□□□□□ -1.08
RFX3-210ENST00000457373 SONP18583 2426 aaKnown RBP8.31□□□□□ -1.08
RFX3-210ENST00000457373 TMEM82A0PJX8 343 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 K7N7A8 449 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 LCE2BO14633 110 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 MRPS14O60783 128 aaKnown RBP8.3□□□□□ -1.08
RFX3-210ENST00000457373 PEX14O75381 377 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 CSTBP04080 98 aaKnown RBP8.3□□□□□ -1.08
RFX3-210ENST00000457373 MMP9P14780 707 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 ZNF44P15621 663 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 CPEP16870 476 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 SERPINA2P20848 420 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 PTGFRP43088 359 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 MTNR1BP49286 362 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 DLX1P56177 255 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 EDDM3BP56851 147 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 PRB3Q04118 309 aaPredicted RBP8.3□□□□□ -1.08
RFX3-210ENST00000457373 SCGB2A2Q13296 93 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 EDDM3AQ14507 147 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 ZNF146Q15072 292 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 TBCEQ15813 527 aaPredicted RBP8.3□□□□□ -1.08
RFX3-210ENST00000457373 SPIN3Q5JUX0 258 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 FAM27D1Q5T7N8 215 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 GPR157Q5UAW9 335 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 BRD3OSQ6XYD6 125 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 GDPD3Q7L5L3 318 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 ZNF367Q7RTV3 350 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 VMO1Q7Z5L0 202 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 PDZD9Q8IXQ8 264 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 CMTM4Q8IZR5 234 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 SPARTQ8N0X7 666 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 BCL6BQ8N143 479 aaPredicted RBP8.3□□□□□ -1.08
RFX3-210ENST00000457373 BPIFB2Q8N4F0 458 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 SVOPQ8N4V2 548 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 OR4S1Q8NGB4 309 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 OR5D13Q8NGL4 314 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 THRSPQ92748 146 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 MUL1Q969V5 352 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 SLC6A7Q99884 636 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 CHST6Q9GZX3 395 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 FAM234AQ9H0X4 552 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 RHOFQ9HBH0 211 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 SIRT7Q9NRC8 400 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 SOX21Q9Y651 276 aaPredicted RBP8.3□□□□□ -1.08
RFX3-210ENST00000457373 KPTNQ9Y664 436 aa8.3□□□□□ -1.08
RFX3-210ENST00000457373 CENPVL3A0A0U1RRI6 287 aa8.29□□□□□ -1.08
RFX3-210ENST00000457373 MEX3AA1L020 520 aaKnown RBP8.29□□□□□ -1.08
RFX3-210ENST00000457373 DEGS1O15121 323 aa8.29□□□□□ -1.08
RFX3-210ENST00000457373 TCF21O43680 179 aa8.29□□□□□ -1.08
RFX3-210ENST00000457373 PSPNO60542 156 aa8.29□□□□□ -1.08
RFX3-210ENST00000457373 ZNF737O75373 536 aa8.29□□□□□ -1.08
RFX3-210ENST00000457373 OR2H2O95918 312 aa8.29□□□□□ -1.08
RFX3-210ENST00000457373 GP2P55259 537 aaKnown RBP8.29□□□□□ -1.08
RFX3-210ENST00000457373 RPL31P62899 125 aaKnown RBP8.29□□□□□ -1.08
RFX3-210ENST00000457373 BLMHQ13867 455 aa8.29□□□□□ -1.08
RFX3-210ENST00000457373 TRAM1Q15629 374 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms