RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 S100A13Q99584 98 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 GFI1Q99684 422 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC22A4Q9H015 551 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 ATG5Q9H1Y0 275 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR51B6Q9H340 312 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 OPA3Q9H6K4 179 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 METTL17Q9H7H0 456 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 TMEM138Q9NPI0 162 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 DIABLOQ9NR28 239 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC17A5Q9NRA2 495 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 GPR173Q9NS66 373 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 RHBDL2Q9NX52 303 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 PTTG3PQ9NZH4 202 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 EIF3KQ9UBQ5 218 aaKnown RBP3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 KCNN3Q9UGI6 736 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 SH3BGRL2Q9UJC5 107 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 PIGLQ9Y2B2 252 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 MRPS28Q9Y2Q9 187 aaKnown RBP3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 MRPS7Q9Y2R9 242 aaKnown RBP3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 V9GYS6 101 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 MED12Q93074 2177 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 A0A1B0GTI1 187 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 hCG_38984A0A1B0GV85 526 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 FAM230AA0A1W2PPH8 454 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 LOC390937A0A1W2PQ73 354 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 A0A1W2PR80 420 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 METTL21EPA6NDL7 271 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 TMEM8BA6NDV4 472 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 ANKRD30BLA7E2S9 258 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 CENPXA8MT69 81 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 EEF1E1-BLOC1S5C9J1V9 151 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 EEF1E1O43324 174 aaKnown RBP3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 PFDN1O60925 122 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 SCGNO76038 276 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 IGLV3-1P01715 115 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 ALDOBP05062 364 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 SERPINA5P05154 406 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 CRHP06850 196 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 HOXD4P09016 255 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 CSF3P09919 207 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 UBBP0CG47 229 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 CCL2P13500 99 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 MYOD1P15172 320 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 COX5AP20674 150 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 SERPINA2P20848 420 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 PRKACBP22694 351 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 OPRM1P35372 400 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 FAUP35544 74 aaKnown RBP3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 TIMP3P35625 211 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 TDGF1P3P51864 188 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 TAS2R20P59543 309 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 ERVK11-1P61568 191 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 RPP30P78346 268 aaKnown RBP3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 MRPS10P82664 201 aaKnown RBP3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 KLRB1Q12918 225 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 GUSBP1Q15486 140 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 TSC22D1Q15714 1073 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 FAM189A2Q15884 450 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 BAK1Q16611 211 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 HACD4Q5VWC8 232 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 GGNBP1Q5YKI7 109 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 C3P1Q6ZMU1 363 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 UTS2BQ765I0 119 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 BHLHA15Q7RTS1 189 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 KRT74Q7RTS7 529 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR2W3Q7Z3T1 314 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 NFE4Q86UQ8 179 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 HAPLN4Q86UW8 402 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 NAA40Q86UY6 237 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 C1orf87Q8N0U7 546 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 C17orf78Q8N4C9 275 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 TOMM5Q8N4H5 51 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 CSNK2A3Q8NEV1 391 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR56B2PQ8NGI1 322 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 FGFBP3Q8TAT2 258 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 CHPT1Q8WUD6 406 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 TNFAIP8L1Q8WVP5 186 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 PIGCQ92535 297 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 BCL2L2Q92843 193 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 FAM46BQ96A09 425 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 SPSB1Q96BD6 273 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 FAM3DQ96BQ1 224 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 HAVCR1Q96D42 359 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 SLC25A38Q96DW6 304 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 BORCS8Q96FH0 119 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 SPACA5Q96QH8 159 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 NKX3-1Q99801 234 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 GAL3ST1Q99999 423 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 UQCC2Q9BRT2 126 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 URM1Q9BTM9 101 aaKnown RBP3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 SFXN3Q9BWM7 321 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 PAPOLGQ9BWT3 736 aaKnown RBP3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 CHST5Q9GZS9 411 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 CST11Q9H112 138 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 OPN3Q9H1Y3 402 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 KCNK15Q9H427 330 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 AUNIPQ9H7T9 357 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 ELL3Q9HB65 397 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 NOX3Q9HBY0 568 aa3.21□□□□□ -1.9
HMGB3P20-201ENST00000417997 ASF1BQ9NVP2 202 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms