RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 KPNB1Q14974 876 aaKnown RBP13.33□□□□□ -0.28
PTPRK-208ENST00000392449 ZNF146Q15072 292 aa13.33□□□□□ -0.28
PTPRK-208ENST00000392449 BEAN1Q3B7T3 259 aa13.33□□□□□ -0.28
PTPRK-208ENST00000392449 UTF1Q5T230 341 aa13.33□□□□□ -0.28
PTPRK-208ENST00000392449 UTS2BQ765I0 119 aa13.33□□□□□ -0.28
PTPRK-208ENST00000392449 Q8N2B8 174 aa13.33□□□□□ -0.28
PTPRK-208ENST00000392449 OR13C3Q8NGS6 347 aa13.33□□□□□ -0.28
PTPRK-208ENST00000392449 TMEM133Q9H2Q1 129 aa13.33□□□□□ -0.28
PTPRK-208ENST00000392449 HMG20AQ9NP66 347 aa13.33□□□□□ -0.28
PTPRK-208ENST00000392449 OR4C45A6NMZ5 311 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 E9PQ18 207 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 MGST3O14880 152 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 CYB5AP00167 134 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 PRKACBP22694 351 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 GLIPR1P48060 266 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 P2RX3P56373 397 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 SNRPGP62308 76 aaKnown RBP13.32□□□□□ -0.28
PTPRK-208ENST00000392449 SCN1BQ07699 218 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 FDX2Q6P4F2 183 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 LHFPL2Q6ZUX7 228 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 ENTHD1Q8IYW4 607 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 OR4P4Q8NGL7 312 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 LGALS12Q96DT0 336 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 CITED2Q99967 270 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-208ENST00000392449 CLEC7AQ9BXN2 247 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 MMP28Q9H239 520 aa13.32□□□□□ -0.28
PTPRK-208ENST00000392449 ISG20L2Q9H9L3 353 aaKnown RBP13.32□□□□□ -0.28
PTPRK-208ENST00000392449 A0A0G2JK05 382 aa13.31□□□□□ -0.28
PTPRK-208ENST00000392449 OCM2P0CE71 109 aa13.31□□□□□ -0.28
PTPRK-208ENST00000392449 OCMP0CE72 109 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-208ENST00000392449 AESQ08117 197 aa13.31□□□□□ -0.28
PTPRK-208ENST00000392449 SPIN3Q5JUX0 258 aa13.31□□□□□ -0.28
PTPRK-208ENST00000392449 SAMD5Q5TGI4 173 aa13.31□□□□□ -0.28
PTPRK-208ENST00000392449 LHFPL3Q86UP9 236 aa13.31□□□□□ -0.28
PTPRK-208ENST00000392449 CBR4Q8N4T8 237 aa13.31□□□□□ -0.28
PTPRK-208ENST00000392449 ACBD7Q8N6N7 88 aa13.31□□□□□ -0.28
PTPRK-208ENST00000392449 WIPF2Q8TF74 440 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-208ENST00000392449 TRUB1Q8WWH5 349 aaKnown RBP13.31□□□□□ -0.28
PTPRK-208ENST00000392449 SPSB1Q96BD6 273 aa13.31□□□□□ -0.28
PTPRK-208ENST00000392449 SEBOXQ9HB31 216 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-208ENST00000392449 NEK6Q9HC98 313 aa13.31□□□□□ -0.28
PTPRK-208ENST00000392449 EXOSC4Q9NPD3 245 aaKnown RBP13.31□□□□□ -0.28
PTPRK-208ENST00000392449 HHLA2Q9UM44 414 aa13.31□□□□□ -0.28
PTPRK-208ENST00000392449 MYRFQ9Y2G1 1151 aa13.31□□□□□ -0.28
PTPRK-208ENST00000392449 ORC6Q9Y5N6 252 aa13.31□□□□□ -0.28
PTPRK-208ENST00000392449 ADARB2-AS1A8MUL3 147 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 E9PI62 339 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 KDM4BO94953 1096 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 CDK2P24941 298 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 ALDH3A2P51648 485 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 DYNLT3P51808 116 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 ALKBH1Q13686 389 aaKnown RBP13.3□□□□□ -0.28
PTPRK-208ENST00000392449 ARSJQ5FYB0 599 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-208ENST00000392449 SLC25A30Q5SVS4 291 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 MINOS1Q5TGZ0 78 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 KCTD20Q7Z5Y7 419 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 ALG8Q9BVK2 526 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 PRSS22Q9GZN4 317 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 AMBNQ9NP70 447 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 PITPNC1Q9UKF7 332 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 EXOGQ9Y2C4 368 aaKnown RBP13.3□□□□□ -0.28
PTPRK-208ENST00000392449 MINOS1-NBL1R4GNA1 71 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 NOTCH3Q9UM47 2321 aa13.3□□□□□ -0.28
PTPRK-208ENST00000392449 SH2D1BO14796 132 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 ZNF44P15621 663 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 GABRB1P18505 474 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 CCR9P51686 369 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 ATXN7L3Q14CW9 347 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-208ENST00000392449 OXLD1Q5BKU9 147 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 MEDAGQ5VYS4 303 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 LPCAT4Q643R3 524 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 ABHD12Q8N2K0 398 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 COQ2Q96H96 371 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 WNT10AQ9GZT5 417 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 ZNF286AQ9HBT8 521 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 GLS2Q9UI32 602 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 UBE2J1Q9Y385 318 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-208ENST00000392449 A0A1W2PRX2 142 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 SH2D7A6NKC9 451 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-208ENST00000392449 FAM90A22PA8MWA6 464 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 HSPB6O14558 160 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 DBTP11182 482 aaKnown RBP13.29□□□□□ -0.28
PTPRK-208ENST00000392449 HTR1DP28221 377 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 ERP29P30040 261 aaKnown RBP13.29□□□□□ -0.28
PTPRK-208ENST00000392449 VDAC2P45880 294 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-208ENST00000392449 IL18R1Q13478 541 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 Q6P435 159 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 R3HDM4Q96D70 268 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 PDCD1LG2Q9BQ51 273 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 COMMD4Q9H0A8 199 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 PPIL3Q9H2H8 161 aaKnown RBP13.29□□□□□ -0.28
PTPRK-208ENST00000392449 ZCCHC4Q9H5U6 513 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 GMPPBQ9Y5P6 360 aa13.29□□□□□ -0.28
PTPRK-208ENST00000392449 TRGV10A0A0A0MS01 117 aa13.28□□□□□ -0.28
PTPRK-208ENST00000392449 SLC33A1O00400 549 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-208ENST00000392449 PEX14O75381 377 aa13.28□□□□□ -0.28
PTPRK-208ENST00000392449 ZFPL1O95159 310 aa13.28□□□□□ -0.28
PTPRK-208ENST00000392449 MT-ND2P03891 347 aa13.28□□□□□ -0.28
PTPRK-208ENST00000392449 HCKP08631 526 aa13.28□□□□□ -0.28
PTPRK-208ENST00000392449 ZP1P60852 638 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms