RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 SYT3Q9BQG1 590 aa12.52□□□□□ -0.4
APP-205ENST00000358918 PLEKHF2Q9H8W4 249 aa12.52□□□□□ -0.4
APP-205ENST00000358918 SLC2A9Q9NRM0 540 aa12.52□□□□□ -0.4
APP-205ENST00000358918 MRPS17Q9Y2R5 130 aaKnown RBP12.52□□□□□ -0.4
APP-205ENST00000358918 ARID1BQ8NFD5 2236 aaPredicted RBP12.52□□□□□ -0.4
APP-205ENST00000358918 MYO15AQ9UKN7 3530 aa12.52□□□□□ -0.4
APP-205ENST00000358918 ABCA7Q8IZY2 2146 aa12.52□□□□□ -0.41
APP-205ENST00000358918 ZNF705GA8MUZ8 300 aaPredicted RBP12.52□□□□□ -0.41
APP-205ENST00000358918 ATXN7O15265 892 aaPredicted RBP12.52□□□□□ -0.41
APP-205ENST00000358918 PHF1O43189 567 aaPredicted RBP12.52□□□□□ -0.41
APP-205ENST00000358918 DFFBO76075 338 aa12.52□□□□□ -0.41
APP-205ENST00000358918 COX5BP10606 129 aa12.52□□□□□ -0.41
APP-205ENST00000358918 ANOS1P23352 680 aa12.52□□□□□ -0.41
APP-205ENST00000358918 CLRN1P58418 232 aa12.52□□□□□ -0.41
APP-205ENST00000358918 THEM4Q5T1C6 240 aa12.52□□□□□ -0.41
APP-205ENST00000358918 SP5Q6BEB4 398 aaPredicted RBP12.52□□□□□ -0.41
APP-205ENST00000358918 C9orf40Q8IXQ3 194 aa12.52□□□□□ -0.41
APP-205ENST00000358918 NUDT22Q9BRQ3 303 aa12.52□□□□□ -0.41
APP-205ENST00000358918 LANCL2Q9NS86 450 aa12.52□□□□□ -0.41
APP-205ENST00000358918 KLHL13Q9P2N7 655 aa12.52□□□□□ -0.41
APP-205ENST00000358918 OR14J1Q9UGF5 321 aa12.52□□□□□ -0.41
APP-205ENST00000358918 SDK1Q7Z5N4 2213 aa12.51□□□□□ -0.41
APP-205ENST00000358918 TRBV24-1A0A075B6N3 115 aa12.51□□□□□ -0.41
APP-205ENST00000358918 LOC102723971A0A1B0GUV8 181 aa12.51□□□□□ -0.41
APP-205ENST00000358918 ZNF732B4DXR9 585 aa12.51□□□□□ -0.41
APP-205ENST00000358918 EREGO14944 169 aa12.51□□□□□ -0.41
APP-205ENST00000358918 OPN1MWP04001 364 aa12.51□□□□□ -0.41
APP-205ENST00000358918 OPN1MW2P0DN77 364 aa12.51□□□□□ -0.41
APP-205ENST00000358918 OPN1MW3P0DN78 364 aa12.51□□□□□ -0.41
APP-205ENST00000358918 SFTPCP11686 197 aa12.51□□□□□ -0.41
APP-205ENST00000358918 CAPZBP47756 277 aa12.51□□□□□ -0.41
APP-205ENST00000358918 FASLGP48023 281 aa12.51□□□□□ -0.41
APP-205ENST00000358918 GFERP55789 205 aa12.51□□□□□ -0.41
APP-205ENST00000358918 RAB11AP62491 216 aa12.51□□□□□ -0.41
APP-205ENST00000358918 CPEB2Q7Z5Q1 589 aaKnown RBP12.51□□□□□ -0.41
APP-205ENST00000358918 CMTM1Q8IZ96 169 aa12.51□□□□□ -0.41
APP-205ENST00000358918 NAXEQ8NCW5 288 aa12.51□□□□□ -0.41
APP-205ENST00000358918 LIN37Q96GY3 246 aaPredicted RBP12.51□□□□□ -0.41
APP-205ENST00000358918 CABLES2Q9BTV7 478 aa12.51□□□□□ -0.41
APP-205ENST00000358918 CDH20Q9HBT6 801 aa12.51□□□□□ -0.41
APP-205ENST00000358918 MMACHCQ9Y4U1 282 aa12.51□□□□□ -0.41
APP-205ENST00000358918 A0A1B0GU03 582 aa12.51□□□□□ -0.41
APP-205ENST00000358918 HOXA6P31267 233 aa12.51□□□□□ -0.41
APP-205ENST00000358918 VAMP2P63027 116 aa12.51□□□□□ -0.41
APP-205ENST00000358918 CRIP3Q6Q6R5 217 aa12.51□□□□□ -0.41
APP-205ENST00000358918 DPPA3Q6W0C5 159 aa12.51□□□□□ -0.41
APP-205ENST00000358918 C5orf24Q7Z6I8 188 aa12.51□□□□□ -0.41
APP-205ENST00000358918 SLC35G3Q8N808 338 aa12.51□□□□□ -0.41
APP-205ENST00000358918 CCDC71LQ8N9Z2 235 aa12.51□□□□□ -0.41
APP-205ENST00000358918 OR1P1Q8NH06 330 aa12.51□□□□□ -0.41
APP-205ENST00000358918 HLA-CQ95604 372 aa12.51□□□□□ -0.41
APP-205ENST00000358918 PGAM5Q96HS1 289 aa12.51□□□□□ -0.41
APP-205ENST00000358918 WWTR1Q9GZV5 400 aa12.51□□□□□ -0.41
APP-205ENST00000358918 METTL9Q9H1A3 318 aa12.51□□□□□ -0.41
APP-205ENST00000358918 C11orf1Q9H5F2 150 aa12.51□□□□□ -0.41
APP-205ENST00000358918 TMEM265A0A087WTH1 108 aa12.5□□□□□ -0.41
APP-205ENST00000358918 MSTNO14793 375 aa12.5□□□□□ -0.41
APP-205ENST00000358918 RER1O15258 196 aa12.5□□□□□ -0.41
APP-205ENST00000358918 ZNF205O95201 554 aa12.5□□□□□ -0.41
APP-205ENST00000358918 ONECUT2O95948 504 aa12.5□□□□□ -0.41
APP-205ENST00000358918 GCGP01275 180 aa12.5□□□□□ -0.41
APP-205ENST00000358918 PNLIPP16233 465 aa12.5□□□□□ -0.41
APP-205ENST00000358918 G0S2P27469 103 aa12.5□□□□□ -0.41
APP-205ENST00000358918 CDAP32320 146 aa12.5□□□□□ -0.41
APP-205ENST00000358918 NKX2-1P43699 371 aaPredicted RBP12.5□□□□□ -0.41
APP-205ENST00000358918 RRADP55042 308 aa12.5□□□□□ -0.41
APP-205ENST00000358918 MEX3BQ6ZN04 569 aaKnown RBP12.5□□□□□ -0.41
APP-205ENST00000358918 OR10A7Q8NGE5 316 aa12.5□□□□□ -0.41
APP-205ENST00000358918 OR5L2Q8NGL0 311 aa12.5□□□□□ -0.41
APP-205ENST00000358918 OR5C1Q8NGR4 320 aa12.5□□□□□ -0.41
APP-205ENST00000358918 OR4X1Q8NH49 305 aa12.5□□□□□ -0.41
APP-205ENST00000358918 TMEM171Q8WVE6 324 aa12.5□□□□□ -0.41
APP-205ENST00000358918 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.5□□□□□ -0.41
APP-205ENST00000358918 CDS2O95674 445 aa12.5□□□□□ -0.41
APP-205ENST00000358918 DTYMKP23919 212 aa12.5□□□□□ -0.41
APP-205ENST00000358918 OPRM1P35372 400 aa12.5□□□□□ -0.41
APP-205ENST00000358918 APLNRP35414 380 aa12.5□□□□□ -0.41
APP-205ENST00000358918 DDIT4LQ96D03 193 aa12.5□□□□□ -0.41
APP-205ENST00000358918 Q96M66 194 aa12.5□□□□□ -0.41
APP-205ENST00000358918 ATG101Q9BSB4 218 aa12.5□□□□□ -0.41
APP-205ENST00000358918 FAAP24Q9BTP7 215 aa12.5□□□□□ -0.41
APP-205ENST00000358918 MRPL13Q9BYD1 178 aaKnown RBP12.5□□□□□ -0.41
APP-205ENST00000358918 SERINC1Q9NRX5 453 aa12.5□□□□□ -0.41
APP-205ENST00000358918 LYRM2Q9NU23 88 aaPredicted RBP12.5□□□□□ -0.41
APP-205ENST00000358918 SOHLH2Q9NX45 425 aa12.5□□□□□ -0.41
APP-205ENST00000358918 GNG13Q9P2W3 67 aa12.5□□□□□ -0.41
APP-205ENST00000358918 ARID1AO14497 2285 aa12.5□□□□□ -0.41
APP-205ENST00000358918 SSSCA1O60232 199 aa12.49□□□□□ -0.41
APP-205ENST00000358918 RAB4AP20338 218 aa12.49□□□□□ -0.41
APP-205ENST00000358918 MDKP21741 143 aaPredicted RBP12.49□□□□□ -0.41
APP-205ENST00000358918 DYNLT3P51808 116 aa12.49□□□□□ -0.41
APP-205ENST00000358918 GRB2P62993 217 aaKnown RBP12.49□□□□□ -0.41
APP-205ENST00000358918 FAM90A2PQ658T7 463 aa12.49□□□□□ -0.41
APP-205ENST00000358918 LANCL3Q6ZV70 420 aa12.49□□□□□ -0.41
APP-205ENST00000358918 TMEM123Q8N131 208 aa12.49□□□□□ -0.41
APP-205ENST00000358918 TMEM252Q8N6L7 170 aa12.49□□□□□ -0.41
APP-205ENST00000358918 SUMF1Q8NBK3 374 aa12.49□□□□□ -0.41
APP-205ENST00000358918 NOXO1Q8NFA2 376 aa12.49□□□□□ -0.41
APP-205ENST00000358918 CADM4Q8NFZ8 388 aa12.49□□□□□ -0.41
APP-205ENST00000358918 OR11L1Q8NGX0 322 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms