RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 SIGLEC9Q9Y336 463 aa10.76□□□□□ -0.69
CLCC1-202ENST00000348264 VGLL3A8MV65 326 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 MGST3O14880 152 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 SULT1B1O43704 296 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 MMP23AO75900 390 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 CCDC159P0C7I6 412 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 GABRA5P31644 462 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 GBX2P52951 348 aaPredicted RBP10.75□□□□□ -0.69
CLCC1-202ENST00000348264 P2RX3P56373 397 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 MRPL28Q13084 256 aaKnown RBP10.75□□□□□ -0.69
CLCC1-202ENST00000348264 IL18R1Q13478 541 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 LPCAT4Q643R3 524 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 PARP16Q8N5Y8 322 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 ZNF555Q8NEP9 628 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 OR11H6Q8NGC7 330 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 CNIH3Q8TBE1 160 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 STMN2Q93045 179 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 RDH12Q96NR8 316 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 JAM3Q9BX67 310 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 COMMD4Q9H0A8 199 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 TCF7L1Q9HCS4 588 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 FGF20Q9NP95 211 aaPredicted RBP10.75□□□□□ -0.69
CLCC1-202ENST00000348264 DHDHQ9UQ10 334 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 TBL2Q9Y4P3 447 aaKnown RBP10.75□□□□□ -0.69
CLCC1-202ENST00000348264 SESN1Q9Y6P5 492 aa10.75□□□□□ -0.69
CLCC1-202ENST00000348264 PRKDCP78527 4128 aaKnown RBP10.74□□□□□ -0.69
CLCC1-202ENST00000348264 IGHV2-26A0A0B4J1V2 119 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 M0QZ24 198 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 SH2D1BO14796 132 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 TIMM23O14925 209 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 KCNAB3O43448 404 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 ALX3O95076 343 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 HCKP08631 526 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 JUNBP17275 347 aaPredicted RBP10.74□□□□□ -0.69
CLCC1-202ENST00000348264 ERP29P30040 261 aaKnown RBP10.74□□□□□ -0.69
CLCC1-202ENST00000348264 ETV1P50549 477 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 KISS1Q15726 138 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 SSX2Q16385 188 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 LRRC36Q1X8D7 754 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 KLHL22Q53GT1 634 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 OR2G6Q5TZ20 316 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 ZNF691Q5VV52 312 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 SERPINA12Q8IW75 414 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 SAXO1Q8IYX7 474 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 OR51A2Q8NGJ7 313 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 OR5D14Q8NGL3 314 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 OR4C13Q8NGP0 309 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 RPS4Y2Q8TD47 263 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 FOXRED1Q96CU9 486 aaPredicted RBP10.74□□□□□ -0.69
CLCC1-202ENST00000348264 FBLN5Q9UBX5 448 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 GLS2Q9UI32 602 aa10.74□□□□□ -0.69
CLCC1-202ENST00000348264 NOTCH3Q9UM47 2321 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 TSPAN15O95858 294 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 TMEM225BP0DP42 221 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 ZNF44P15621 663 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 SOX2P48431 317 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 RAB13P51153 203 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 EFNB2P52799 333 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 DYNC1I2Q13409 638 aaKnown RBP10.73□□□□□ -0.69
CLCC1-202ENST00000348264 CDK5R1Q15078 307 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 FAM189A2Q15884 450 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 PRAMEF5Q5TYX0 476 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 ZNF529Q6P280 563 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 Q6P435 159 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 CCBE1Q6UXH8 406 aaPredicted RBP10.73□□□□□ -0.69
CLCC1-202ENST00000348264 BAIAP2L2Q6UXY1 529 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 LIAT1Q6ZQX7 453 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 TRAPPC6BQ86SZ2 158 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 CYGBQ8WWM9 190 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 COQ2Q96H96 371 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 NKX3-1Q99801 234 aaPredicted RBP10.73□□□□□ -0.69
CLCC1-202ENST00000348264 TMEM133Q9H2Q1 129 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 RANBP3Q9H6Z4 567 aaPredicted RBP10.73□□□□□ -0.69
CLCC1-202ENST00000348264 RAB18Q9NP72 206 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 TAS2R4Q9NYW5 299 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 TCF19Q9Y242 345 aa10.73□□□□□ -0.69
CLCC1-202ENST00000348264 UBE2J1Q9Y385 318 aaPredicted RBP10.73□□□□□ -0.69
CLCC1-202ENST00000348264 SIRT4Q9Y6E7 314 aaPredicted RBP10.73□□□□□ -0.69
CLCC1-202ENST00000348264 A0A0G2JK05 382 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 SLC33A1O00400 549 aaPredicted RBP10.72□□□□□ -0.69
CLCC1-202ENST00000348264 GABRPO00591 440 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 RPSAP08865 295 aaKnown RBP10.72□□□□□ -0.69
CLCC1-202ENST00000348264 RAB3AP20336 220 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 LMO1P25800 156 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 DCKP27707 260 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 GDNFP39905 211 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 KIR2DS4P43632 304 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 GLIPR1P48060 266 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 SCN1BQ07699 218 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 AESQ08117 197 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 ATXN7L3Q14CW9 347 aaPredicted RBP10.72□□□□□ -0.69
CLCC1-202ENST00000348264 RCN1Q15293 331 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 HIST2H2BDQ6DRA6 164 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 TMEM219Q86XT9 240 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 OR4P4Q8NGL7 312 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 HAVCR2Q8TDQ0 301 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 MALSU1Q96EH3 234 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 CLEC7AQ9BXN2 247 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 NPFFR1Q9GZQ6 430 aa10.72□□□□□ -0.69
CLCC1-202ENST00000348264 MMP27Q9H306 513 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms