RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 GCSAMLQ5JQS6 135 aa10.16□□□□□ -0.78
PTPN4-201ENST00000263708 OTUD1Q5VV17 481 aaPredicted RBP10.16□□□□□ -0.78
PTPN4-201ENST00000263708 CEP290O15078 2479 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 A0A1B0GUL6 1792 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 DYNLT3P51808 116 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 FABP5Q01469 135 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 GABRA6Q16445 453 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 DNLZQ5SXM8 178 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 HES3Q5TGS1 186 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 DHRS4L2Q6PKH6 230 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 TEX37Q96LM6 180 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 RAB40CQ96S21 281 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 HLA-BQ31612 363 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 RNF165Q6ZSG1 346 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 ARHGAP5-AS1Q96IT6 56 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 TTC32Q5I0X7 151 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 TRAV39A0A0B4J263 110 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 TUBAL3A6NHL2 446 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 COMPP49747 757 aaPredicted RBP10.15□□□□□ -0.78
PTPN4-201ENST00000263708 CLDN10P78369 228 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 TMEM229BQ8NBD8 167 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 SAP30LQ9HAJ7 183 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 MANBALQ9NQG1 85 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 NAT8Q9UHE5 227 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 CKAP5Q14008 2032 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 CST4P01036 141 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 APCSP02743 223 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 PSG5Q15238 335 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 GBGT1Q8N5D6 347 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 OR4S2Q8NH73 311 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 OR6C3Q9NZP0 311 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 GFRA1P56159 465 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 C16orf82Q7Z2V1 217 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 MCHR2Q969V1 340 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 CXXC4Q9H2H0 198 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 C1RLQ9NZP8 487 aa10.15□□□□□ -0.78
PTPN4-201ENST00000263708 FUT7Q11130 342 aa10.15□□□□□ -0.79
PTPN4-201ENST00000263708 NHLRC1Q6VVB1 395 aa10.15□□□□□ -0.79
PTPN4-201ENST00000263708 THSD4Q6ZMP0 1018 aa10.15□□□□□ -0.79
PTPN4-201ENST00000263708 CLRN3Q8NCR9 226 aa10.15□□□□□ -0.79
PTPN4-201ENST00000263708 ACER3Q9NUN7 267 aa10.15□□□□□ -0.79
PTPN4-201ENST00000263708 KLK11Q9UBX7 282 aa10.15□□□□□ -0.79
PTPN4-201ENST00000263708 WSB1Q9Y6I7 421 aa10.15□□□□□ -0.79
PTPN4-201ENST00000263708 SNRPGP15A8MWD9 76 aa10.15□□□□□ -0.79
PTPN4-201ENST00000263708 KHDC3LQ587J8 217 aa10.15□□□□□ -0.79
PTPN4-201ENST00000263708 C11orf87Q6NUJ2 197 aa10.15□□□□□ -0.79
PTPN4-201ENST00000263708 GNRHR2Q96P88 292 aa10.15□□□□□ -0.79
PTPN4-201ENST00000263708 PCGF1Q9BSM1 259 aa10.15□□□□□ -0.79
PTPN4-201ENST00000263708 HSPB2A8KAH6 182 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 PGA3P0DJD8 388 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 GCAP28676 217 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 HSPB2Q16082 182 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 AANATQ16613 207 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 HLA-DRB5Q30154 266 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 A0A1W2PPC4 97 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 C10orf113Q5VZT2 155 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 SSX8Q7RTT4 187 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 BVESQ8NE79 360 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 ADAMTS5Q9UNA0 930 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 TMEM262E9PQX1 116 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 SPINK2P20155 84 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 METAP1P53582 386 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 FOXO1Q12778 655 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 ZNF774Q6NX45 483 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 AQP10Q96PS8 301 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 RTN4RQ9BZR6 473 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 AKR7A2O43488 359 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 AVPR2P30518 371 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 MEOX2P50222 304 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 PP6455Q8WZ26 134 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 CSNK1G1Q9HCP0 422 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 DUXBA0A1W2PPF3 345 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 PYCARD-AS1I3L0S3 204 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 DHHO43323 396 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 MCM3APO60318 1980 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 HIST1H1BP16401 226 aaKnown RBP10.14□□□□□ -0.79
PTPN4-201ENST00000263708 TECRQ9NZ01 308 aaKnown RBP10.14□□□□□ -0.79
PTPN4-201ENST00000263708 IGKV6-21A0A0C4DH24 114 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 AGFG2O95081 481 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 FPR2P25090 351 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 SSMEM1Q8WWF3 244 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 RASL12Q9NYN1 266 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 INSIG2Q9Y5U4 225 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 OR2W5A6NFC9 320 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 SRFP11831 508 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 ANKRD55Q3KP44 614 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 MRPL54Q6P161 138 aaKnown RBP10.14□□□□□ -0.79
PTPN4-201ENST00000263708 OR4C13Q8NGP0 309 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 C16orf92Q96LL3 132 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 MRGPRX1Q96LB2 322 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 C4orf45Q96LM5 186 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 SLC35B3Q9H1N7 401 aa10.14□□□□□ -0.79
PTPN4-201ENST00000263708 C11orf94C9JXX5 98 aa10.13□□□□□ -0.79
PTPN4-201ENST00000263708 CA2P00918 260 aa10.13□□□□□ -0.79
PTPN4-201ENST00000263708 OR4A47Q6IF82 309 aa10.13□□□□□ -0.79
PTPN4-201ENST00000263708 FAHD2BQ6P2I3 314 aaPredicted RBP10.13□□□□□ -0.79
PTPN4-201ENST00000263708 SLC25A33Q9BSK2 321 aa10.13□□□□□ -0.79
PTPN4-201ENST00000263708 FOXJ3Q9UPW0 622 aa10.13□□□□□ -0.79
PTPN4-201ENST00000263708 OR5AC1P0C628 307 aa10.13□□□□□ -0.79
PTPN4-201ENST00000263708 SPPL3Q8TCT6 385 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms