RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 KCNJ8Q15842 424 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 MICBQ29980 383 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 SMIM21Q3B7S5 101 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 NHLRC3Q5JS37 347 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 TEX36Q5VZQ5 186 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 BAIAP2L2Q6UXY1 529 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 SPICQ8N5J4 248 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 NUDT16L1Q9BRJ7 211 aaKnown RBP17.31■□□□□ 0.36
RTCA-201ENST00000260563 REG4Q9BYZ8 158 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 WDR13Q9H1Z4 485 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 IGHV4-61A0A0C4DH41 118 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.31■□□□□ 0.36
RTCA-201ENST00000260563 GEMIN2O14893 280 aaKnown RBP17.31■□□□□ 0.36
RTCA-201ENST00000260563 USF1P22415 310 aaPredicted RBP17.31■□□□□ 0.36
RTCA-201ENST00000260563 GABRR1P24046 479 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 PTBP1P26599 531 aaKnown RBP eCLIP17.31■□□□□ 0.36
RTCA-201ENST00000260563 SNU13P55769 128 aaKnown RBP17.31■□□□□ 0.36
RTCA-201ENST00000260563 TAF9Q16594 264 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 TMEM155Q4W5P6 130 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 DEFB108BQ8NET1 73 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 OR10R2Q8NGX6 335 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 POM121Q96HA1 1249 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 RASL12Q9NYN1 266 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 IL36RNQ9UBH0 155 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 RABL2AQ9UBK7 228 aaPredicted RBP17.31■□□□□ 0.36
RTCA-201ENST00000260563 RABL2BQ9UNT1 228 aa17.31■□□□□ 0.36
RTCA-201ENST00000260563 MRPS7Q9Y2R9 242 aaKnown RBP17.31■□□□□ 0.36
RTCA-201ENST00000260563 YLPM1P49750 1951 aaKnown RBP17.3■□□□□ 0.36
RTCA-201ENST00000260563 IGHV3OR15-7A0A075B7D8 119 aa17.3■□□□□ 0.36
RTCA-201ENST00000260563 A0A0G2JMP0 313 aa17.3■□□□□ 0.36
RTCA-201ENST00000260563 A0A0X1KG70 313 aa17.3■□□□□ 0.36
RTCA-201ENST00000260563 SOCS1O15524 211 aa17.3■□□□□ 0.36
RTCA-201ENST00000260563 MUC1P15941 1255 aaPredicted RBP17.3■□□□□ 0.36
RTCA-201ENST00000260563 TAS2R20P59543 309 aa17.3■□□□□ 0.36
RTCA-201ENST00000260563 ZNF79Q15937 498 aa17.3■□□□□ 0.36
RTCA-201ENST00000260563 PYHIN1Q6K0P9 492 aa17.3■□□□□ 0.36
RTCA-201ENST00000260563 FIP1L1Q6UN15 594 aaKnown RBP17.3■□□□□ 0.36
RTCA-201ENST00000260563 SPNS3Q6ZMD2 512 aa17.3■□□□□ 0.36
RTCA-201ENST00000260563 ACP7Q6ZNF0 438 aa17.3■□□□□ 0.36
RTCA-201ENST00000260563 OR4M2Q8NGB6 313 aa17.3■□□□□ 0.36
RTCA-201ENST00000260563 TMEM165Q9HC07 324 aa17.3■□□□□ 0.36
RTCA-201ENST00000260563 TRAV18A0A075B6X5 111 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 A0A096LNT2 108 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A10PA6NDY2 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A18PA6NE21 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A16PA6NEW6 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A20PA6NIJ5 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A8PA6NJQ4 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A7PA6NKC0 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FOXI3A8MTJ6 420 aaPredicted RBP17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A22PA8MWA6 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A12PA8MX19 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A5PA8MXJ8 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A23PA8MXZ1 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A15PP0C7V4 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A13PP0C7W8 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A14PP0C7W9 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A24PP0C7X0 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 MNDAP41218 407 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 PITPNAQ00169 270 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 IL13RA2Q14627 380 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 LINC00596Q86U02 117 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 FAM90A1Q86YD7 464 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 CHST4Q8NCG5 386 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 CLDND2Q8NHS1 167 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 SEH1LQ96EE3 360 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 TMEM246Q9BRR3 403 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 NLKQ9UBE8 527 aa17.29■□□□□ 0.36
RTCA-201ENST00000260563 TPPPO94811 219 aa17.28■□□□□ 0.36
RTCA-201ENST00000260563 HLA-DQB1P01920 261 aa17.28■□□□□ 0.36
RTCA-201ENST00000260563 BLVRBP30043 206 aaPredicted RBP17.28■□□□□ 0.36
RTCA-201ENST00000260563 PPP5CP53041 499 aa17.28■□□□□ 0.36
RTCA-201ENST00000260563 LOXL1Q08397 574 aaPredicted RBP17.28■□□□□ 0.36
RTCA-201ENST00000260563 MPV17LQ2QL34 196 aa17.28■□□□□ 0.36
RTCA-201ENST00000260563 SPIN3Q5JUX0 258 aa17.28■□□□□ 0.36
RTCA-201ENST00000260563 DCDC5Q6ZRR9 648 aa17.28■□□□□ 0.36
RTCA-201ENST00000260563 RAB3CQ96E17 227 aa17.28■□□□□ 0.36
RTCA-201ENST00000260563 ABHD1Q96SE0 405 aa17.28■□□□□ 0.36
RTCA-201ENST00000260563 SRRQ9GZT4 340 aa17.28■□□□□ 0.36
RTCA-201ENST00000260563 PCDHB10Q9UN67 800 aa17.28■□□□□ 0.36
RTCA-201ENST00000260563 CEACAM18A8MTB9 384 aa17.27■□□□□ 0.36
RTCA-201ENST00000260563 H7C1Q1 480 aa17.27■□□□□ 0.36
RTCA-201ENST00000260563 GYPAP02724 150 aa17.27■□□□□ 0.36
RTCA-201ENST00000260563 HEXAP06865 529 aa17.27■□□□□ 0.36
RTCA-201ENST00000260563 CD40LGP29965 261 aa17.27■□□□□ 0.36
RTCA-201ENST00000260563 TMEM50BP56557 158 aa17.27■□□□□ 0.36
RTCA-201ENST00000260563 ZNF146Q15072 292 aa17.27■□□□□ 0.36
RTCA-201ENST00000260563 PDCD1Q15116 288 aa17.27■□□□□ 0.36
RTCA-201ENST00000260563 PYDC2Q56P42 97 aa17.27■□□□□ 0.36
RTCA-201ENST00000260563 Q6ZTK2 550 aa17.27■□□□□ 0.36
RTCA-201ENST00000260563 SNX29P2Q8IUI4 249 aa17.27■□□□□ 0.36
RTCA-201ENST00000260563 C15orf40Q8WUR7 153 aa17.27■□□□□ 0.36
RTCA-201ENST00000260563 RAB39BQ96DA2 213 aa17.27■□□□□ 0.36
RTCA-201ENST00000260563 DOCK11Q5JSL3 2073 aa17.27■□□□□ 0.36
RTCA-201ENST00000260563 J3QRK9 145 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 NDUFA2O43678 99 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 OR7C1O76099 320 aaPredicted RBP17.26■□□□□ 0.35
RTCA-201ENST00000260563 RPS2P15880 293 aaKnown RBP17.26■□□□□ 0.35
RTCA-201ENST00000260563 DUSP1P28562 367 aa17.26■□□□□ 0.35
RTCA-201ENST00000260563 IKZF1Q13422 519 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms