RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 TMEM42Q69YG0 159 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 GSG1LQ6UXU4 331 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 LYG2Q86SG7 212 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 CITED4Q96RK1 184 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 PLSCR4Q9NRQ2 329 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 TREM2Q9NZC2 230 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 FAM215AQ9Y5M1 114 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 PQLC2LA1A4F0 135 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 ATP6V1G2-DDX39BF2Z307 99 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 CST4P01036 141 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 FCGR3AP08637 254 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 CHATP28329 748 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 EDDM3AQ14507 147 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 ZMYND11Q15326 602 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 LTC4SQ16873 150 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 EIF2S3LQ2VIR3 472 aaKnown RBP7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 Q5BKY6 102 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 FAM219AQ8IW50 185 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 ZFAND1Q8TCF1 268 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 TM2D1Q9BX74 207 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 SPACA1Q9HBV2 294 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 FBXO9Q9UK97 447 aaPredicted RBP7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 AMDHD2Q9Y303 409 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 IGKV1D-8A0A087WSZ0 117 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 MBD3L4A6NDZ8 208 aaPredicted RBP7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 MBD3L3A6NE82 208 aaPredicted RBP7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 MBD3L5A6NJ08 208 aaPredicted RBP7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 FAM90A27PA6NNH2 459 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 J3QT63 122 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 IFNA21P01568 189 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 GIPP09681 153 aaPredicted RBP7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 FGF12P61328 243 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 SP6Q3SY56 376 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 DCAF12L2Q5VW00 463 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 FAM89BQ8N5H3 189 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 SCCPDHQ8NBX0 429 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 DEFB108BQ8NET1 73 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 OR13G1Q8NGZ3 307 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 MBD3L2Q8NHZ7 208 aaPredicted RBP7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 HS3ST6Q96QI5 342 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 OCSTAMPQ9BR26 566 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 DNTTIP1Q9H147 329 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 RDH8Q9NYR8 311 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 ZNF107Q9UII5 783 aaPredicted RBP7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 PURGQ9UJV8 347 aaKnown RBP7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 EDARQ9UNE0 448 aa7.45□□□□□ -1.22
CALCOCO2-201ENST00000258947 C9orf170A2RU37 121 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 CNOT4O95628 575 aaKnown RBP7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 S100GP29377 79 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 ALDH3B1P43353 468 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 CEBPDP49716 269 aaPredicted RBP7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 UCNP55089 124 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 ZNF154Q13106 437 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 TMEM128Q5BJH2 165 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 SIGIRRQ6IA17 410 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 ZNF474Q6S9Z5 364 aaPredicted RBP7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 ZDHHC22Q8N966 263 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 MED30Q96HR3 178 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 SHANK1Q9Y566 2161 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 CACNA1AO00555 2505 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 IGHV2OR16-5A0A0B4J2B6 119 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 ZNF735P0CB33 412 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 PIGPP57054 158 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 C2orf68Q2NKX9 166 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 DOLPP1Q86YN1 238 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 INO80EQ8NBZ0 244 aaPredicted RBP7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 RND1Q92730 232 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 WDR89Q96FK6 387 aaPredicted RBP7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 NUDT16L1Q9BRJ7 211 aaKnown RBP7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 SFXN3Q9BWM7 321 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 MFFQ9GZY8 342 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 PLK3Q9H4B4 646 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 SLC23A1Q9UHI7 598 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 ATP23Q9Y6H3 246 aa7.44□□□□□ -1.22
CALCOCO2-201ENST00000258947 OR5H14A6NHG9 310 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 C16orf97H3BN30 126 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 H3BUI4 141 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 ADAP1O75689 374 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 HOXB1P14653 301 aaPredicted RBP7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 FPR2P25090 351 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 SERPINF1P36955 418 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 KLF3P57682 345 aaPredicted RBP7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 NAAAQ02083 359 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 GRK1Q15835 563 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 IGSF11Q5DX21 431 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 ZNF546Q86UE3 836 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 WDR31Q8NA23 367 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 SUMF2Q8NBJ7 301 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 C1orf162Q8NEQ5 155 aaPredicted RBP7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 OR11H4Q8NGC9 324 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 PLSCR2Q9NRY7 297 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 C1orf123Q9NWV4 160 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 UBE2J1Q9Y385 318 aaPredicted RBP7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 IGHV1-18A0A0C4DH31 117 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 SLC33A1O00400 549 aaPredicted RBP7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 HSD17B6O14756 317 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 SH2D1BO14796 132 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 TNFSF12O43508 249 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 GNRHRP30968 328 aa7.43□□□□□ -1.22
CALCOCO2-201ENST00000258947 HTR2BP41595 481 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms