RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 OR4A16Q8NH70 328 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 OR1F12Q8NHA8 337 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 HIPK2Q9H2X6 1198 aa12.91□□□□□ -0.34
VPS36-207ENST00000611132 ADAM11O75078 769 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 FCARP24071 287 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 RANP62826 216 aaKnown RBP12.9□□□□□ -0.34
VPS36-207ENST00000611132 RABEPKQ7Z6M1 372 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 ZNF439Q8NDP4 499 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 OBP2BQ9NPH6 170 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 ARGFXA6NJG6 315 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 NPIPB9F8W1W9 429 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 BCAT2O15382 392 aaPredicted RBP12.9□□□□□ -0.34
VPS36-207ENST00000611132 CDX1P47902 265 aaPredicted RBP12.9□□□□□ -0.34
VPS36-207ENST00000611132 BSXQ3C1V8 233 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 SYT13Q7L8C5 426 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 OR6X1Q8NH79 312 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 ADGRG7Q96K78 797 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 BOKQ9UMX3 212 aaPredicted RBP12.9□□□□□ -0.34
VPS36-207ENST00000611132 LOC285556D6RIA3 1793 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 LIPT2A6NK58 231 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 M0R143 59 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 MPPED1O15442 326 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 COL9A1P20849 921 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 GCNT2Q8N0V5 402 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 SIGLECL1Q8N7X8 197 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 PLA2G2FQ9BZM2 168 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 DOK5Q9P104 306 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 GNG12Q9UBI6 72 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 LHX6Q9UPM6 363 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 TRAPPC1Q9Y5R8 145 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 TSC2P49815 1807 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 DOCK6Q96HP0 2047 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 H3BMH7 237 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 ZNF737O75373 536 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 VDAC1P21796 283 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 PTGER4P35408 488 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 FGF8P55075 233 aaPredicted RBP12.9□□□□□ -0.34
VPS36-207ENST00000611132 TGFBR3Q03167 851 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 LTC4SQ16873 150 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 TOMM20LQ6UXN7 152 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 POM121Q96HA1 1249 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 TECTBQ96PL2 329 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 GFI1Q99684 422 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 CALHM2Q9HA72 323 aa12.9□□□□□ -0.34
VPS36-207ENST00000611132 CST2P09228 141 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 EN2P19622 333 aaPredicted RBP12.89□□□□□ -0.35
VPS36-207ENST00000611132 SELENOVP59797 346 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 RAB35Q15286 201 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 YRDCQ86U90 279 aaKnown RBP12.89□□□□□ -0.35
VPS36-207ENST00000611132 ADPRHL1Q8NDY3 354 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 NAT6Q93015 286 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 MS4A10Q96PG2 267 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 CACFD1Q9UGQ2 172 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 BRWD3Q6RI45 1802 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 GEMIN2O14893 280 aaKnown RBP12.89□□□□□ -0.35
VPS36-207ENST00000611132 GABRG2P18507 467 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 MPV17LQ2QL34 196 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 KHDC3LQ587J8 217 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 CYB561D1Q8N8Q1 229 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 SPACA9Q96E40 222 aaPredicted RBP12.89□□□□□ -0.35
VPS36-207ENST00000611132 IP6K3Q96PC2 410 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 ATP5SQ99766 215 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 GGACTQ9BVM4 153 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 TP53BP1Q12888 1972 aaPredicted RBP12.89□□□□□ -0.35
VPS36-207ENST00000611132 OR8U8P0C7N1 319 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 DTYMKP23919 212 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 TPPP2P59282 170 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 TEX30Q5JUR7 227 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 LSRQ86X29 649 aaPredicted RBP12.89□□□□□ -0.35
VPS36-207ENST00000611132 ERGIC1Q969X5 290 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 NAT8Q9UHE5 227 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 NKX2-6A6NCS4 301 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 CHST1O43916 411 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 TRGC2P03986 189 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 ERVS71-1P61550 626 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 FAM58AQ8N1B3 248 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 MSI2Q96DH6 328 aaKnown RBP12.89□□□□□ -0.35
VPS36-207ENST00000611132 CTDSP1Q9GZU7 261 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 Q9N2K0 584 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 PARD6AQ9NPB6 346 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 TREM2Q9NZC2 230 aa12.89□□□□□ -0.35
VPS36-207ENST00000611132 ZSWIM8A7E2V4 1837 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 MELTFP08582 738 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 HIST1H3AP68431 136 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 SHHQ15465 462 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 TGIF1Q15583 401 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.88□□□□□ -0.35
VPS36-207ENST00000611132 ZDHHC23Q8IYP9 409 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 POC1AQ8NBT0 407 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 TMEM68Q96MH6 324 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 CIB3Q96Q77 187 aaPredicted RBP12.88□□□□□ -0.35
VPS36-207ENST00000611132 ALKBH3Q96Q83 286 aaPredicted RBP12.88□□□□□ -0.35
VPS36-207ENST00000611132 RAB9BQ9NP90 201 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 PPYP01298 95 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 ACAA1P09110 424 aaPredicted RBP12.88□□□□□ -0.35
VPS36-207ENST00000611132 EXT1Q16394 746 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 TBC1D26Q86UD7 250 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 HDHD3Q9BSH5 251 aaPredicted RBP12.88□□□□□ -0.35
VPS36-207ENST00000611132 MENTQ9BUN1 341 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 ZNF391Q9UJN7 358 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms