RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 NUBP1P53384 320 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 SPATA46Q5T0L3 261 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 ANGPTL6Q8NI99 470 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 HS3ST6Q96QI5 342 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 WDR13Q9H1Z4 485 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 MTCH1Q9NZJ7 389 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 BOD1L1Q8NFC6 3051 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 TRAV17A0A0B4J275 112 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 TEX13DA0A0J9YY54 714 aaPredicted RBP11.69□□□□□ -0.54
NEK3-205ENST00000610828 CTSDP07339 412 aaPredicted RBP11.69□□□□□ -0.54
NEK3-205ENST00000610828 RBMXP38159 391 aaKnown RBP11.69□□□□□ -0.54
NEK3-205ENST00000610828 FXYD4P59646 89 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 DHRS11Q6UWP2 260 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 IGFL2Q6UWQ7 119 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 SGPP2Q8IWX5 399 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 OR5A2Q8NGI9 324 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 OR5L1Q8NGL2 311 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 ST8SIA2Q92186 375 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 DCUN1D4Q92564 292 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 OR10C1Q96KK4 312 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 CLCF1Q9UBD9 225 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 TRAPPC2LH3BP13 241 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 BCL2L11O43521 198 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 LYZL6O75951 148 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 CALCRP30988 508 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 LUMP51884 338 aaPredicted RBP11.69□□□□□ -0.54
NEK3-205ENST00000610828 UBA52P62987 128 aaKnown RBP11.69□□□□□ -0.54
NEK3-205ENST00000610828 TCF15Q12870 199 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 OR2T2Q6IF00 324 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 HAGHLQ6PII5 290 aaPredicted RBP11.69□□□□□ -0.54
NEK3-205ENST00000610828 TFAP2EQ6VUC0 442 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 MKXQ8IYA7 352 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 SAXO1Q8IYX7 474 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 Q8NFD4 153 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 OR5M9Q8NGP3 310 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 CXorf58Q96LI9 332 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 ZNF471Q9BX82 626 aaPredicted RBP11.69□□□□□ -0.54
NEK3-205ENST00000610828 DECR2Q9NUI1 292 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 IL36RNQ9UBH0 155 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 PTPRBP23467 1997 aa11.69□□□□□ -0.54
NEK3-205ENST00000610828 SYNGR1O43759 233 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 CELA3BP08861 270 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 ZNF728P0DKX0 622 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 IGHV1-2P23083 117 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 FCGR2CP31995 323 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 FGF12P61328 243 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 TGFBR3Q03167 851 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 TBC1D28Q2M2D7 210 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 ELP2Q6IA86 826 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 TMEM211Q6ICI0 200 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 Q6ZPA2 131 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 FAM214BQ7L5A3 538 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 MYPOPQ86VE0 399 aaPredicted RBP11.68□□□□□ -0.54
NEK3-205ENST00000610828 TMEM200AQ86VY9 491 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 OR5P3Q8WZ94 311 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 EXTL1Q92935 676 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 ZNF75AQ96N20 296 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 GLRX2Q9NS18 164 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 C1orf123Q9NWV4 160 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 HSPB6O14558 160 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 CRYZL1O95825 349 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 PIGPP57054 158 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 UBE2NP61088 152 aaKnown RBP11.68□□□□□ -0.54
NEK3-205ENST00000610828 AANATQ16613 207 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 PLEKHN1Q494U1 663 aaPredicted RBP11.68□□□□□ -0.54
NEK3-205ENST00000610828 FAM219AQ8IW50 185 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 CNEP1R1Q8N9A8 125 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 GSKIPQ9P0R6 139 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 ZNF292O60281 2723 aa11.68□□□□□ -0.54
NEK3-205ENST00000610828 FAM90A10PA6NDY2 464 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 FAM90A18PA6NE21 464 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 FAM90A16PA6NEW6 464 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 FAM90A20PA6NIJ5 464 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 CRYM-AS1A6NIL9 109 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 FAM90A8PA6NJQ4 464 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 FAM90A7PA6NKC0 464 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 FAM90A22PA8MWA6 464 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 FAM90A12PA8MX19 464 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 FAM90A5PA8MXJ8 464 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 FAM90A23PA8MXZ1 464 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 H0YIZ8 118 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 PDGFAP04085 211 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 FAM90A15PP0C7V4 464 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 FAM90A13PP0C7W8 464 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 FAM90A14PP0C7W9 464 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 FAM90A24PP0C7X0 464 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 CA6P23280 308 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 DUSP1P28562 367 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 IDH3GP51553 393 aaPredicted RBP11.67□□□□□ -0.54
NEK3-205ENST00000610828 ABCA11PQ4W5N1 156 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 IGF2-ASQ6U949 168 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 RELL2Q8NC24 303 aaPredicted RBP11.67□□□□□ -0.54
NEK3-205ENST00000610828 CCDC120Q96HB5 630 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 RNF126Q9BV68 326 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 MPC1Q9Y5U8 109 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 hCG_1807616A0A1W2PRN6 198 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 F5H0A9 414 aaPredicted RBP11.67□□□□□ -0.54
NEK3-205ENST00000610828 ZNF14P17017 642 aaPredicted RBP11.67□□□□□ -0.54
NEK3-205ENST00000610828 PRKACAP17612 351 aa11.67□□□□□ -0.54
NEK3-205ENST00000610828 PMELP40967 661 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms