RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 FAM209AQ5JX71 171 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 ZNF660Q6AZW8 331 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-217ENST00000584582 MYPOPQ86VE0 399 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-217ENST00000584582 BAP18Q8IXM2 172 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 TMEM178AQ8NBL3 297 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 DEFB108BQ8NET1 73 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 SPSB1Q96BD6 273 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 TREM2Q9NZC2 230 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 LIPGQ9Y5X9 500 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 B4E171 279 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 CRHP06850 196 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 PVALBP20472 110 aaPredicted RBP9.81□□□□□ -0.84
TOP3A-217ENST00000584582 TSPAN7P41732 249 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 AADACL3Q5VUY0 350 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 CMTM1Q8IZ96 169 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 CPEB3Q8NE35 698 aaKnown RBP9.81□□□□□ -0.84
TOP3A-217ENST00000584582 MITD1Q8WV92 249 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 NANOS1Q8WY41 292 aaKnown RBP9.81□□□□□ -0.84
TOP3A-217ENST00000584582 LRRC46Q96FV0 321 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 TAF9BQ9HBM6 251 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 USF3Q68DE3 2245 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 CHD8Q9HCK8 2581 aa9.81□□□□□ -0.84
TOP3A-217ENST00000584582 LOC102723996A0A087X1L8 192 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 LRRC3CA6NJW4 275 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 DEGS1O15121 323 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 SYNGR1O43759 233 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 TIMM8AO60220 97 aaPredicted RBP9.8□□□□□ -0.84
TOP3A-217ENST00000584582 OR2F2O95006 317 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 SFT2D2O95562 160 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 TSPAN15O95858 294 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 FUT3P21217 361 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 RPL12P30050 165 aaKnown RBP9.8□□□□□ -0.84
TOP3A-217ENST00000584582 HGFACQ04756 655 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 SSBP1Q04837 148 aaKnown RBP9.8□□□□□ -0.84
TOP3A-217ENST00000584582 PDZK1IP1Q13113 114 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 OR2F1Q13607 317 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 RBM39Q14498 530 aaKnown RBP9.8□□□□□ -0.84
TOP3A-217ENST00000584582 TMEM123Q8N131 208 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 ZDHHC22Q8N966 263 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 OR1J1Q8NGS3 322 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 ARL11Q969Q4 196 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 RRNAD1Q96FB5 475 aaKnown RBP9.8□□□□□ -0.84
TOP3A-217ENST00000584582 HINT2Q9BX68 163 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 GTF3C1Q12789 2109 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 ZGRF1Q86YA3 2104 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 CD300LBA8K4G0 201 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 CALCRP30988 508 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 CD80P33681 288 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 IZUMO4Q1ZYL8 232 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 GGNBP1Q5YKI7 109 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 SLC38A6Q8IZM9 456 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 TPRX1Q8N7U7 411 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 FAM213BQ8TBF2 198 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 HEXA-AS1Q9H8Q6 139 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 PROK2Q9HC23 129 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 MSGN1A6NI15 193 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 SP1P08047 785 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 FPR2P25090 351 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 P2RY4P51582 365 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 OR2A2Q6IF42 318 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 OR8U1Q8NH10 309 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 NINJ1Q92982 152 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 SF3B5Q9BWJ5 86 aaKnown RBP9.8□□□□□ -0.84
TOP3A-217ENST00000584582 SAV1Q9H4B6 383 aaPredicted RBP9.8□□□□□ -0.84
TOP3A-217ENST00000584582 WDFY3Q8IZQ1 3526 aa9.8□□□□□ -0.84
TOP3A-217ENST00000584582 CDIPTO14735 213 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 BCL2L11O43521 198 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 SSSCA1O60232 199 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 TMEM127O75204 238 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 OR2A4O95047 310 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 ZNF17P17021 662 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 AADACP22760 399 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 ID4P47928 161 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 EIF5AP63241 154 aaKnown RBP9.79□□□□□ -0.84
TOP3A-217ENST00000584582 LY6G6FQ5SQ64 297 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 FAM166AQ6J272 317 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 SPAG16Q8N0X2 631 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 SLC30A7Q8NEW0 376 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 OR6K3Q8NGY3 331 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 C2orf50Q96LR7 162 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 OR2A7Q96R45 310 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 ZPBPQ9BS86 351 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 TINAGQ9UJW2 476 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 MGAQ8IWI9 3026 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 BORCS7-ASMTA0A0B4J1R7 106 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 WIPF3A6NGB9 483 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 EIF3GO75821 320 aaKnown RBP eCLIP9.79□□□□□ -0.84
TOP3A-217ENST00000584582 CST2P09228 141 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 ZNF735P0CB33 412 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 FAM3AP98173 230 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 PNLIPRP3Q17RR3 467 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 LPCAT3Q6P1A2 487 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 TFAP2EQ6VUC0 442 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 DTX1Q86Y01 620 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 CCDC71LQ8N9Z2 235 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 MSL2Q9HCI7 577 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 PNRC2Q9NPJ4 139 aaKnown RBP9.79□□□□□ -0.84
TOP3A-217ENST00000584582 DNAJB11Q9UBS4 358 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 BOD1L1Q8NFC6 3051 aa9.79□□□□□ -0.84
TOP3A-217ENST00000584582 PDCD6O75340 191 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms