RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 SLC34A2O95436 690 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 ZNF728P0DKX0 622 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 BCL3P20749 454 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 FUT3P21217 361 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 GPM6AP51674 278 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 RNFT1Q5M7Z0 435 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 MRPL21Q7Z2W9 205 aaKnown RBP15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 MED12LQ86YW9 2145 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 Q8NFD4 153 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 SLAMF9Q96A28 289 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 AQP10Q96PS8 301 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 HS3ST6Q96QI5 342 aa15.95■□□□□ 0.14
PRPF40B-208ENST00000548436 ESPL1Q14674 2120 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 A0A1B0GW55 424 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 ARGFXA6NJG6 315 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 ACTL6AO96019 429 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 HOXD4P09016 255 aaPredicted RBP15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 DUX4L2P0CJ85 424 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 DUX4L3P0CJ86 424 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 DUX4L4P0CJ87 422 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 DUX4L5P0CJ88 424 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 DUX4L6P0CJ89 424 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 DUX4L7P0CJ90 424 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 FCGR2CP31995 323 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 ARR3P36575 388 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 FXYD4P59646 89 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 S100A10P60903 97 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 MCEMP1Q8IX19 187 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 SHARPINQ9H0F6 387 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 DNTTIP1Q9H147 329 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 C12orf49Q9H741 205 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 ZNF442Q9H7R0 627 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 ZNF286AQ9HBT8 521 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 C12orf4Q9NQ89 552 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 DUX4Q9UBX2 424 aa15.94■□□□□ 0.14
PRPF40B-208ENST00000548436 TPT1P13693 172 aaKnown RBP15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 CD46P15529 392 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 HAAOP46952 286 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 IAH1Q2TAA2 248 aaPredicted RBP15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 GLRX5Q86SX6 157 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 SLC30A7Q8NEW0 376 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 MRPL24Q96A35 216 aaKnown RBP15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 PRR33A8MZF0 331 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 NAAAQ02083 359 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 SPEM2Q0P670 501 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 CEACAM21Q3KPI0 293 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 SP6Q3SY56 376 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 TMEM211Q6ICI0 200 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 FOXRED2Q8IWF2 684 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 BAP18Q8IXM2 172 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 ZDHHC23Q8IYP9 409 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 SLC38A6Q8IZM9 456 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 LDAHQ9H6V9 325 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 SPRR3Q9UBC9 169 aa15.93■□□□□ 0.14
PRPF40B-208ENST00000548436 CST4P01036 141 aa15.92■□□□□ 0.14
PRPF40B-208ENST00000548436 PET100P0DJ07 73 aa15.92■□□□□ 0.14
PRPF40B-208ENST00000548436 TRIP6Q15654 476 aaKnown RBP15.92■□□□□ 0.14
PRPF40B-208ENST00000548436 HIKESHIQ53FT3 197 aa15.92■□□□□ 0.14
PRPF40B-208ENST00000548436 GGNBP1Q5YKI7 109 aa15.92■□□□□ 0.14
PRPF40B-208ENST00000548436 WDYHV1Q96HA8 205 aa15.92■□□□□ 0.14
PRPF40B-208ENST00000548436 MS4A7Q9GZW8 240 aaPredicted RBP15.92■□□□□ 0.14
PRPF40B-208ENST00000548436 ZNF552Q9H707 407 aaPredicted RBP15.92■□□□□ 0.14
PRPF40B-208ENST00000548436 NAA60Q9H7X0 242 aa15.92■□□□□ 0.14
PRPF40B-208ENST00000548436 TAS2R3Q9NYW6 316 aa15.92■□□□□ 0.14
PRPF40B-208ENST00000548436 MEMO1Q9Y316 297 aa15.92■□□□□ 0.14
PRPF40B-208ENST00000548436 CUL9Q8IWT3 2517 aa15.92■□□□□ 0.14
PRPF40B-208ENST00000548436 ZNF732B4DXR9 585 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 IL18BPO95998 194 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 OR5AC1P0C628 307 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 PMELP40967 661 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 TMEM187Q14656 261 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 PHLDA2Q53GA4 152 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 TMEM200AQ86VY9 491 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 RTN4IP1Q8WWV3 396 aaPredicted RBP15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 CNTNAP3BQ96NU0 1288 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 CNTNAP3Q9BZ76 1288 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 SLC5A7Q9GZV3 580 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 MTCH1Q9NZJ7 389 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 IL36RNQ9UBH0 155 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 DNAJB11Q9UBS4 358 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 SPEF1Q9Y4P9 236 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 FGF16O43320 207 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 WNT5AP41221 380 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 PLP2Q04941 152 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 ABCA11PQ4W5N1 156 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 ZNF766Q5HY98 468 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 ZNF585AQ6P3V2 769 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 BOLLQ8N9W6 283 aaKnown RBP15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 OR1S2Q8NGQ3 325 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 MOB3AQ96BX8 217 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 TUBD1Q9UJT1 453 aa15.91■□□□□ 0.14
PRPF40B-208ENST00000548436 LILRA1O75019 489 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FGF12P61328 243 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 ARG2P78540 354 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 IGSF11Q5DX21 431 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 TMPRSS7Q7RTY8 843 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 C5orf24Q7Z6I8 188 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 SAXO1Q8IYX7 474 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 TMED6Q8WW62 240 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms