RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 FAM189A2Q15884 450 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 LIAT1Q6ZQX7 453 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 C1QL4Q86Z23 238 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 D2HGDHQ8N465 521 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 CYB561D1Q8N8Q1 229 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 OR6X1Q8NH79 312 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 ZNF700Q9H0M5 742 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 HSF4Q9ULV5 492 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 NOSIPQ9Y314 301 aaKnown RBP12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 NKX2-6A6NCS4 301 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 WRBO00258 174 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 HSD17B6O14756 317 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 HIST1H2BKO60814 126 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 IGLV3-1P01715 115 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 HIST1H2BJP06899 126 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 HEXBP07686 556 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 RNF224P0DH78 156 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 EPHA1P21709 976 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 HIST1H2BOP23527 126 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 HIST1H2BBP33778 126 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 PTGDSP41222 190 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 HIST1H2BDP58876 126 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 HIST1H2BCP62807 126 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 GRB2P62993 217 aaKnown RBP12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 HIST2H2BEQ16778 126 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 TMEM217Q8N7C4 229 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 HIST1H2BHQ93079 126 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 BOD1Q96IK1 185 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 HIST1H2BNQ99877 126 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 HIST1H2BMQ99879 126 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 NECAP2Q9NVZ3 263 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 V9GYS6 101 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 OR2J2O76002 312 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 CST7O76096 145 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 TRGC2P03986 189 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 DUSP1P28562 367 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 MAS1LP35410 378 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 RGS19P49795 217 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 UBE2KP61086 200 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 PRAMEF20Q5VT98 475 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 ZNF385AQ96PM9 386 aaKnown RBP12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 PRDM13Q9H4Q3 707 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 METTL7AQ9H8H3 244 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 FGF21Q9NSA1 209 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 GAR1Q9NY12 217 aaKnown RBP12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 TREM2Q9NZC2 230 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 STRAPQ9Y3F4 350 aaKnown RBP12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 DMDP11532 3685 aa12.1□□□□□ -0.47
SCNN1A-215ENST00000540037 CYB5BO43169 146 aa12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 AFF3P51826 1226 aaKnown RBP12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 RAB1AP62820 205 aa12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 ENDOGQ14249 297 aaKnown RBP12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 RSU1Q15404 277 aa12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 HIST3H3Q16695 136 aa12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 GPR157Q5UAW9 335 aa12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 NFAM1Q8NET5 270 aaPredicted RBP12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 GALNT14Q96FL9 552 aa12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 PISDQ9UG56 409 aa12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 S100A2P29034 98 aa12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 C4orf17Q53FE4 359 aa12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 HIKESHIQ53FT3 197 aa12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 ANKRD37Q7Z713 158 aa12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 C17orf78Q8N4C9 275 aa12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 INTS12Q96CB8 462 aaKnown RBP12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 MRGPRX4Q96LA9 322 aa12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 RBM24Q9BX46 236 aaKnown RBP12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 SLC7A11Q9UPY5 501 aa12.09□□□□□ -0.47
SCNN1A-215ENST00000540037 IGHV1OR21-1A0A087WYE8 117 aa12.08□□□□□ -0.47
SCNN1A-215ENST00000540037 SSSCA1O60232 199 aa12.08□□□□□ -0.47
SCNN1A-215ENST00000540037 DEFA6Q01524 100 aa12.08□□□□□ -0.47
SCNN1A-215ENST00000540037 CXorf66Q5JRM2 361 aaPredicted RBP12.08□□□□□ -0.47
SCNN1A-215ENST00000540037 FBXL14Q8N1E6 418 aa12.08□□□□□ -0.47
SCNN1A-215ENST00000540037 OR2C3Q8N628 320 aa12.08□□□□□ -0.47
SCNN1A-215ENST00000540037 CCDC54Q8NEL0 328 aa12.08□□□□□ -0.47
SCNN1A-215ENST00000540037 OR10AD1Q8NGE0 317 aa12.08□□□□□ -0.47
SCNN1A-215ENST00000540037 OXGR1Q96P68 337 aa12.08□□□□□ -0.47
SCNN1A-215ENST00000540037 GLRX2Q9NS18 164 aa12.08□□□□□ -0.47
SCNN1A-215ENST00000540037 IGKV1-12A0A0C4DH73 117 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 A0A1B0GV90 55 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 M0R135 149 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 TNFSF12O43508 249 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 TIAF1O95411 115 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 IGKV1D-12P01611 117 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 SRP19P09132 144 aaKnown RBP12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 MDKP21741 143 aaPredicted RBP12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 ECI1P42126 302 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 ZNF429Q86V71 674 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 ZNF610Q8N9Z0 462 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 OR4D5Q8NGN0 318 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 ZNF799Q96GE5 643 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 C14orf144Q96I85 54 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 NKX2-4Q9H2Z4 354 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 PRO1933Q9H354 126 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 PLEK2Q9NYT0 353 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 WNT16Q9UBV4 365 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 PATE4P0C8F1 98 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 AADACP22760 399 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 GAMTQ14353 236 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 IL13RA2Q14627 380 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms