RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 SLC25A26Q70HW3 274 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 TRAPPC6BQ86SZ2 158 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 LINC00596Q86U02 117 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 Q8IYB0 196 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 OSR2Q8N2R0 312 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 CELF2-AS1Q8N7Q2 184 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 TMEM229BQ8NBD8 167 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 DUSP18Q8NEJ0 188 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 OR51F2Q8NH61 342 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 GPX8Q8TED1 209 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 AQP3Q92482 292 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 PIK3IP1Q96FE7 263 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 NEDD4LQ96PU5 975 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 TM2D1Q9BX74 207 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 CACNG6Q9BXT2 260 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 LPAR5Q9H1C0 372 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 CXXC4Q9H2H0 198 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 BANF2Q9H503 90 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.23□□□□□ -1.257e-11■■■■■ 38.1
VAPB-206ENST00000520497 MCUBQ9NWR8 336 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 TAAR3PQ9P1P4 343 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 POU2F3Q9UKI9 436 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 DCHS2Q6V1P9 2916 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 A0A0A6YYD4 124 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 A0A1W2PP11 408 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 A0A1W2PPR1 153 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 PLSCR5A0PG75 271 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 TMEM235A6NFC5 223 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 ZNF736B4DX44 427 aaPredicted RBP7.22□□□□□ -1.25
VAPB-206ENST00000520497 DISC1C4P0D8 188 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 RAB27BO00194 218 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 SYNGR1O43759 233 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 LANCL1O43813 399 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 GOSR1O95249 250 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 SFTPBP07988 381 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 MELTFP08582 738 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 ACAA1P09110 424 aaPredicted RBP7.22□□□□□ -1.25
VAPB-206ENST00000520497 BLVRBP30043 206 aaPredicted RBP7.22□□□□□ -1.25
VAPB-206ENST00000520497 SLC6A1P30531 599 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 SERPINF1P36955 418 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 RFX2P48378 723 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 ZNF81P51508 661 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 RAG2P55895 527 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 ZMYND11Q15326 602 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 NKPD1Q17RQ9 610 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 ZNF260Q3ZCT1 412 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 ELP2Q6IA86 826 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 HAGHLQ6PII5 290 aaPredicted RBP7.22□□□□□ -1.25
VAPB-206ENST00000520497 ZNF782Q6ZMW2 699 aaPredicted RBP7.22□□□□□ -1.25
VAPB-206ENST00000520497 DNM1P46Q6ZS02 220 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 C11orf53Q8IXP5 236 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 FAM89BQ8N5H3 189 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 SCCPDHQ8NBX0 429 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 OR2Z1Q8NG97 314 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 OR10K1Q8NGX5 313 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 SLAMF9Q96A28 289 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 ELMOD3Q96FG2 381 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 Q96M66 194 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 DHRS9Q9BPW9 319 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 SPACA1Q9HBV2 294 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 HRASLSQ9HDD0 168 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 CISD1Q9NZ45 108 aaKnown RBP7.22□□□□□ -1.25
VAPB-206ENST00000520497 MTCH1Q9NZJ7 389 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 NLKQ9UBE8 527 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 SCP2D1Q9UJQ7 156 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 ZDHHC8Q9ULC8 765 aa7.22□□□□□ -1.25
VAPB-206ENST00000520497 FAM221AA4D161 298 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 FOXI3A8MTJ6 420 aaPredicted RBP7.21□□□□□ -1.26
VAPB-206ENST00000520497 C17orf100A8MU93 164 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 B9A039 149 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 INMT-MINDY4F8WBC2 141 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 M0R233 179 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 PRAF2O60831 178 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 NOS1APO75052 506 aaPredicted RBP7.21□□□□□ -1.26
VAPB-206ENST00000520497 RHBDL1O75783 438 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 RAB3DO95716 219 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 IGHV1-46P01743 117 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 MT-ND4P03905 459 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 IFNA6P05013 189 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 CD55P08174 381 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 PGA5P0DJD9 388 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 SPNP16150 400 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 BCL3P20749 454 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 GABRR1P24046 479 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 GATA4P43694 442 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 NPBWR2P48146 333 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 TAS2R46P59540 309 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 ERVK11-1P61568 191 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 RBMS2Q15434 407 aaKnown RBP7.21□□□□□ -1.26
VAPB-206ENST00000520497 SWI5Q1ZZU3 235 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 MPV17LQ2QL34 196 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 MOGAT2Q3SYC2 334 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 SPRNQ5BIV9 151 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 RNASE10Q5GAN6 216 aaKnown RBP7.21□□□□□ -1.26
VAPB-206ENST00000520497 NHLRC3Q5JS37 347 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 PRAMEF6Q5VXH4 476 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 STEAP1BQ6NZ63 245 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 MEX3BQ6ZN04 569 aaKnown RBP7.21□□□□□ -1.26
VAPB-206ENST00000520497 BTN2A1Q7KYR7 527 aa7.21□□□□□ -1.26
VAPB-206ENST00000520497 ZNF554Q86TJ5 538 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms