RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 RPP14O95059 124 aaKnown RBP12.66□□□□□ -0.38
SRRT-209ENST00000474896 ZNF19P17023 458 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 LGALS4P56470 323 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 ERVFRD-1P60508 538 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 GNG3P63215 75 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 MFGE8Q08431 387 aaPredicted RBP12.66□□□□□ -0.38
SRRT-209ENST00000474896 CEP78Q5JTW2 689 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 TMEM200BQ69YZ2 307 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 KCTD20Q7Z5Y7 419 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 C11orf42Q8N5U0 333 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 OR8B12Q8NGG6 310 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 SDSLQ96GA7 329 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 YTHDF1Q9BYJ9 559 aaKnown RBP12.66□□□□□ -0.38
SRRT-209ENST00000474896 MMP28Q9H239 520 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 ISG20L2Q9H9L3 353 aaKnown RBP12.66□□□□□ -0.38
SRRT-209ENST00000474896 R4GMQ9 66 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 RFPL4AA6NLU0 287 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 LOC110117498-PIK3R3F6TDL0 507 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 RFPL4AL1F8VTS6 287 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 FBXO24O75426 580 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 CD28P10747 220 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 COX7A1P24310 79 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 MAP2K3P46734 347 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 RAB13P51153 203 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 GABARAPL2P60520 117 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 RPL31P62899 125 aaKnown RBP12.65□□□□□ -0.38
SRRT-209ENST00000474896 HABP2Q14520 560 aaPredicted RBP12.65□□□□□ -0.38
SRRT-209ENST00000474896 CEACAM21Q3KPI0 293 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 OR2G6Q5TZ20 316 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 RNLSQ5VYX0 342 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 TMPRSS11AQ6ZMR5 421 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 LIAT1Q6ZQX7 453 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 MOB3CQ70IA8 216 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 EGFL6Q8IUX8 553 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 CD177Q8N6Q3 437 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 OR4S1Q8NGB4 309 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 OR4M1Q8NGD0 313 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 OR52N1Q8NH53 320 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 AQP3Q92482 292 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 PELI1Q96FA3 418 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 CDCA4Q9BXL8 241 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 MOB1AQ9H8S9 216 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 ZNF702PQ9H963 129 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 RASL12Q9NYN1 266 aa12.65□□□□□ -0.38
SRRT-209ENST00000474896 A0A1W2PPH5 198 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 ACOD1A6NK06 481 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 MYL12BO14950 172 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 MTRF1O75570 445 aaKnown RBP12.64□□□□□ -0.39
SRRT-209ENST00000474896 MT-ND2P03891 347 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 HTR1AP08908 422 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 HAGHLQ6PII5 290 aaPredicted RBP12.64□□□□□ -0.39
SRRT-209ENST00000474896 ACP7Q6ZNF0 438 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 KRT74Q7RTS7 529 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 PRSS48Q7RTY5 328 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 LHFPL4Q7Z7J7 247 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 OR5A2Q8NGI9 324 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 RNF166Q96A37 237 aaPredicted RBP12.64□□□□□ -0.39
SRRT-209ENST00000474896 R3HDM4Q96D70 268 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 CCDC90BQ9GZT6 254 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 PBOV1Q9GZY1 135 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 SERTAD4Q9NUC0 356 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 NECAP2Q9NVZ3 263 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 NUFIP1Q9UHK0 495 aaKnown RBP12.64□□□□□ -0.39
SRRT-209ENST00000474896 OR52A1Q9UKL2 312 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 GTF2A1LQ9UNN4 478 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 ERGIC3Q9Y282 383 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 SNX5Q9Y5X3 404 aa12.64□□□□□ -0.39
SRRT-209ENST00000474896 hCG_1809904A0A1W2PP81 198 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 A0A1W2PPE2 198 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 A0A1W2PR64 198 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 A0A1W2PRV1 198 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 CCL3L1P16619 93 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 PRDX2P32119 198 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 MRPL28Q13084 256 aaKnown RBP12.63□□□□□ -0.39
SRRT-209ENST00000474896 IRF3Q14653 427 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 PLA1AQ53H76 456 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 BCL2L15Q5TBC7 163 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 ZBTB37Q5TC79 503 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 CCBE1Q6UXH8 406 aaPredicted RBP12.63□□□□□ -0.39
SRRT-209ENST00000474896 CATSPERDQ86XM0 798 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 DYNAPQ8N1N2 210 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 ZNF561Q8N587 486 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 NANOGP1Q8N7R0 232 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 ZNF485Q8NCK3 441 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 ZNF488Q96MN9 340 aa12.63□□□□□ -0.39
SRRT-209ENST00000474896 AURKAIP1Q9NWT8 199 aaPredicted RBP12.63□□□□□ -0.39
SRRT-209ENST00000474896 FAM90A8PA6NJQ4 464 aa12.62□□□□□ -0.39
SRRT-209ENST00000474896 E9PI62 339 aa12.62□□□□□ -0.39
SRRT-209ENST00000474896 MRPS14O60783 128 aaKnown RBP12.62□□□□□ -0.39
SRRT-209ENST00000474896 TTRP02766 147 aa12.62□□□□□ -0.39
SRRT-209ENST00000474896 CEBPDP49716 269 aaPredicted RBP12.62□□□□□ -0.39
SRRT-209ENST00000474896 GBX2P52951 348 aaPredicted RBP12.62□□□□□ -0.39
SRRT-209ENST00000474896 WNT4P56705 351 aa12.62□□□□□ -0.39
SRRT-209ENST00000474896 NANOS3P60323 173 aaKnown RBP12.62□□□□□ -0.39
SRRT-209ENST00000474896 RIPPLY1Q0D2K3 151 aa12.62□□□□□ -0.39
SRRT-209ENST00000474896 KCTD21Q4G0X4 260 aa12.62□□□□□ -0.39
SRRT-209ENST00000474896 FDX2Q6P4F2 183 aa12.62□□□□□ -0.39
SRRT-209ENST00000474896 ZNF782Q6ZMW2 699 aaPredicted RBP12.62□□□□□ -0.39
SRRT-209ENST00000474896 NDUFA11Q86Y39 141 aa12.62□□□□□ -0.39
SRRT-209ENST00000474896 ELMOD2Q8IZ81 293 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms