RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 OR5H6Q8NGV6 325 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC7A6Q92536 515 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 FGGYQ96C11 551 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 FAM122AQ96E09 287 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 REEP6Q96HR9 211 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 CMTM3Q96MX0 182 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZFP3Q96NJ6 502 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 TAAR6Q96RI8 345 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 GPER1Q99527 375 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 SRRQ9GZT4 340 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 WNT5BQ9H1J7 359 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 PPIL3Q9H2H8 161 aaKnown RBP3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 MIXL1Q9H2W2 232 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 RGCCQ9H4X1 137 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 PPP1R3EQ9H7J1 279 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 CDH20Q9HBT6 801 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF71Q9NQZ8 489 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF275Q9NSD4 429 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 BEX4Q9NWD9 120 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 RABL2AQ9UBK7 228 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 HSPB7Q9UBY9 170 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF391Q9UJN7 358 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 SPATA2Q9UM82 520 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 RABL2BQ9UNT1 228 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 V9GYH0 126 aa3.23□□□□□ -1.89
HMGB3P20-201ENST00000417997 MED12LQ86YW9 2145 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 A0A0G2JMP0 313 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 A0A0X1KG70 313 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 LINC00854A0A1B0GVQ3 168 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 A0A1W2PQ09 198 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 C5orf49A4QMS7 147 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 GGT3PA6NGU5 568 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 A6NIN4 97 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 DHRS7CA6NNS2 312 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 IFNL4K9M1U5 179 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 SULT1B1O43704 296 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 LYZL6O75951 148 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 PTTG1O95997 202 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 HLA-HP01893 362 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 APOHP02749 345 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 AMBPP02760 352 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 MMP7P09237 267 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 COX5BP10606 129 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 IL7P13232 177 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 IGFBP3P17936 291 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 ADRA2CP18825 462 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 ELK1P19419 428 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 CCL1P22362 96 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 IGHV1-2P23083 117 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 IL32P24001 234 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 STOMP27105 288 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 HTR2CP28335 458 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 OTX1P32242 354 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF93P35789 620 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 CDKN1AP38936 164 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 DDOSTP39656 456 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 MNDAP41218 407 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 PITPNBP48739 271 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 POU3F4P49335 361 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 EVX1P49640 407 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 IDH3GP51553 393 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 CASP6P55212 293 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 SCN1BQ07699 218 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 RIPPLY1Q0D2K3 151 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 TAB1Q15750 504 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 SNAI3Q3KNW1 292 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 HIKESHIQ53FT3 197 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 GLYATL3Q5SZD4 288 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 PLCXD3Q63HM9 321 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 HIST2H2BCQ6DN03 193 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 HIST2H2BDQ6DRA6 164 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 MZT2BQ6NZ67 158 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 Q6ZT83 130 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 MDP1Q86V88 176 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 SNX29P2Q8IUI4 249 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 CCDC36Q8IYA8 594 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF101Q8IZC7 436 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 CENPSQ8N2Z9 138 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 Q8N402 240 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 FTMTQ8N4E7 242 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC30A7Q8NEW0 376 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR4M2Q8NGB6 313 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR51D1Q8NGF3 324 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR51A2Q8NGJ7 313 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR5L1Q8NGL2 311 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR2AE1Q8NHA4 323 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 SYNPRQ8TBG9 265 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 SETD6Q8TBK2 473 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 FAM57AQ8TBR7 257 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 ENKURQ8TC29 256 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 NPRL2Q8WTW4 380 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 C15orf40Q8WUR7 153 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 PP6455Q8WZ26 134 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 PIGTQ969N2 578 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 RFT1Q96AA3 541 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 APOBEC3DQ96AK3 386 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 C10orf35Q96D05 121 aa3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 ADAT3Q96EY9 351 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 S100A16Q96FQ6 103 aaKnown RBP3.22□□□□□ -1.89
HMGB3P20-201ENST00000417997 TECTBQ96PL2 329 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms