RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 GRK1Q15835 563 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 ZIK1Q3SY52 487 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-208ENST00000392449 Q6ZS46 218 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 OR4S1Q8NGB4 309 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 OR51A4Q8NGJ6 313 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 FGGYQ96C11 551 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 SNX22Q96L94 193 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 SPACA5Q96QH8 159 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 OR5M11Q96RB7 305 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 SERTAD4Q9NUC0 356 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 HILPDAQ9Y5L2 63 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 A6NDX4 124 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 SERPINA3P01011 423 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 PRKACAP17612 351 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 AZGP1P25311 298 aaKnown RBP13.36□□□□□ -0.27
PTPRK-208ENST00000392449 RBP2P50120 134 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 MTCP1P56278 107 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 CDC42P60953 191 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 ZNF91Q05481 1191 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 CNN3Q15417 329 aaKnown RBP13.36□□□□□ -0.27
PTPRK-208ENST00000392449 FAM58AQ8N1B3 248 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 OR11H6Q8NGC7 330 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 RFKQ969G6 155 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 RNFT2Q96EX2 444 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 IMPAD1Q9NX62 359 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 TBL2Q9Y4P3 447 aaKnown RBP13.36□□□□□ -0.27
PTPRK-208ENST00000392449 PLXNB1O43157 2135 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 IGKV1-12A0A0C4DH73 117 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 TRBV2A0A0J9YWF9 115 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 J3QRE1 110 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 SIRPB1O00241 398 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 EI24O14681 340 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 IGKV1D-12P01611 117 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 PRB2P02812 416 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-208ENST00000392449 ALPLP05186 524 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 CD28P10747 220 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 ATF1P18846 271 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 OR3A1P47881 315 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 ATP1B3P54709 279 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 NSUN5P1Q3KNT7 163 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 TMEM95Q3KNT9 176 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 DMRTA1Q5VZB9 504 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 LIAT1Q6ZQX7 453 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 ZNF676Q8N7Q3 588 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 OR5D18Q8NGL1 313 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 PP6455Q8WZ26 134 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 FOXRED1Q96CU9 486 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-208ENST00000392449 MALSU1Q96EH3 234 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 CDCA4Q9BXL8 241 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 ABCB10Q9NRK6 738 aa13.36□□□□□ -0.27
PTPRK-208ENST00000392449 IGHV2-26A0A0B4J1V2 119 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 hADV38S2A0JD32 116 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 DAPL1A0PJW8 107 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 FAM172BPA6NC97 362 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 CIB2O75838 187 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 ATP5HO75947 161 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 RBP4P02753 201 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 ZNF20P17024 532 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 PEX2P28328 305 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 MEF2CQ06413 473 aaPredicted RBP13.35□□□□□ -0.27
PTPRK-208ENST00000392449 TMED1Q13445 227 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 CCDC54Q8NEL0 328 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 RPS4Y2Q8TD47 263 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 GSTK1Q9Y2Q3 226 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 LINC00312Q9Y6C7 94 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 SESN1Q9Y6P5 492 aa13.35□□□□□ -0.27
PTPRK-208ENST00000392449 KIAA2026Q5HYC2 2103 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 H3BNX3 289 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 J3QLW9 94 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 SLC16A6O15403 523 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 OPN1MWP04001 364 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 OPN1MW2P0DN77 364 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 OPN1MW3P0DN78 364 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 ZNF19P17023 458 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 CD24P25063 80 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 BLCAPP62952 87 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 SLC34A1Q06495 639 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 PDZK1IP1Q13113 114 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 FBLN7Q53RD9 439 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 PRAMEF5Q5TYX0 476 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 TMEM244Q5VVB8 128 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 C11orf88Q6PI97 169 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 TRAPPC6BQ86SZ2 158 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 Q8IYB0 196 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 DNAAF1Q8NEP3 725 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 OR13C9Q8NGT0 318 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 NDNFQ8TB73 568 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 C10orf35Q96D05 121 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 PELI1Q96FA3 418 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 HRASLS5Q96KN8 279 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 C4orf36Q96KX1 117 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 OPALINQ96PE5 141 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 MBOAT4Q96T53 435 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 ING3Q9NXR8 418 aa13.34□□□□□ -0.27
PTPRK-208ENST00000392449 F2RL2O00254 374 aa13.33□□□□□ -0.28
PTPRK-208ENST00000392449 FBXO24O75426 580 aa13.33□□□□□ -0.28
PTPRK-208ENST00000392449 OR2H2O95918 312 aa13.33□□□□□ -0.28
PTPRK-208ENST00000392449 ISG15P05161 165 aa13.33□□□□□ -0.28
PTPRK-208ENST00000392449 HTR1AP08908 422 aa13.33□□□□□ -0.28
PTPRK-208ENST00000392449 GDNFP39905 211 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms