RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PRSS50Q9UI38 385 aa13.16□□□□□ -0.3
CHD4-201ENST00000357008 SYNGR2O43760 224 aa13.16□□□□□ -0.3
CHD4-201ENST00000357008 HTR1DP28221 377 aa13.16□□□□□ -0.3
CHD4-201ENST00000357008 ISXQ2M1V0 245 aa13.16□□□□□ -0.3
CHD4-201ENST00000357008 LBHQ53QV2 105 aaPredicted RBP13.16□□□□□ -0.3
CHD4-201ENST00000357008 CXorf67Q86X51 503 aaPredicted RBP13.16□□□□□ -0.3
CHD4-201ENST00000357008 PACRGQ96M98 296 aaPredicted RBP13.16□□□□□ -0.3
CHD4-201ENST00000357008 PCED1AQ9H1Q7 454 aa13.16□□□□□ -0.3
CHD4-201ENST00000357008 OR2D2Q9H210 308 aa13.16□□□□□ -0.3
CHD4-201ENST00000357008 OR5B21A6NL26 309 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 ZNF785A8K8V0 405 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 MFNGO00587 321 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 SPRY3O43610 288 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 SULT1A1P50225 295 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 CEBPEQ15744 281 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 SLC36A1Q7Z2H8 476 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 OR1L3Q8NH93 324 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 RFESDQ8TAC1 157 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 SNCGO76070 127 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 TTRP02766 147 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 HOXB3P14651 431 aaPredicted RBP13.15□□□□□ -0.3
CHD4-201ENST00000357008 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.15□□□□□ -0.3
CHD4-201ENST00000357008 LYG1Q8N1E2 194 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 OR10A7Q8NGE5 316 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 COX14Q96I36 57 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 STARD10Q9Y365 291 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 TAF1P21675 1872 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 NINQ8N4C6 2090 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 OR4C45A6NMZ5 311 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 VDAC1P21796 283 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 MESTQ5EB52 335 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 TBC1D26Q86UD7 250 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 OR13G1Q8NGZ3 307 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 ASB10Q8WXI3 467 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 TRMT61AQ96FX7 289 aaKnown RBP13.15□□□□□ -0.3
CHD4-201ENST00000357008 FLRT3Q9NZU0 649 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 AMDHD2Q9Y303 409 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 TRGV5A0A0B4J1U4 118 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 RBP4P02753 201 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 FZD5Q13467 585 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 ANKRD37Q7Z713 158 aa13.15□□□□□ -0.3
CHD4-201ENST00000357008 IGHV5-51A0A0C4DH38 117 aa13.15□□□□□ -0.31
CHD4-201ENST00000357008 C7orf66A4D0T2 115 aa13.15□□□□□ -0.31
CHD4-201ENST00000357008 ZXDAP98168 799 aa13.15□□□□□ -0.31
CHD4-201ENST00000357008 COTL1Q14019 142 aa13.15□□□□□ -0.31
CHD4-201ENST00000357008 TMEM97Q5BJF2 176 aa13.15□□□□□ -0.31
CHD4-201ENST00000357008 ZMAT5Q9UDW3 170 aaKnown RBP13.15□□□□□ -0.31
CHD4-201ENST00000357008 BRWD1Q9NSI6 2320 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 DEFB108AA8MXU0 73 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 DAOP14920 347 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 RPS4Y1P22090 263 aaKnown RBP13.14□□□□□ -0.31
CHD4-201ENST00000357008 SMAD4Q13485 552 aaKnown RBP13.14□□□□□ -0.31
CHD4-201ENST00000357008 ZNF345Q14585 488 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 ALKBH6Q3KRA9 238 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 TMEM91Q6ZNR0 172 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 GPBAR1Q8TDU6 330 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 C10orf35Q96D05 121 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 ESRP2Q9H6T0 727 aaKnown RBP13.14□□□□□ -0.31
CHD4-201ENST00000357008 TMEM9BQ9NQ34 198 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 PARP11Q9NR21 331 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 MRPS18AQ9NVS2 196 aaKnown RBP13.14□□□□□ -0.31
CHD4-201ENST00000357008 VAX2Q9UIW0 290 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 ELF5Q9UKW6 265 aaPredicted RBP13.14□□□□□ -0.31
CHD4-201ENST00000357008 NEU3Q9UQ49 428 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 RREB1Q92766 1687 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 A0A1B0GTQ1 180 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 SOCS1O15524 211 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 CRYBA1P05813 215 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 DLK1P80370 383 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 OR1C1Q15619 314 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 ATG4DQ86TL0 474 aaPredicted RBP13.14□□□□□ -0.31
CHD4-201ENST00000357008 OR5D13Q8NGL4 314 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 OR1L4Q8NGR5 311 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 SARGQ9BW04 601 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 M0QZK8 103 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 GGCTO75223 188 aaKnown RBP13.14□□□□□ -0.31
CHD4-201ENST00000357008 TNFSF15O95150 251 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 OR10G8Q8NGN5 311 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 OR10C1Q96KK4 312 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 RAB33BQ9H082 229 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 SLC52A3Q9NQ40 469 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 MIOXQ9UGB7 285 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 FAM109BQ6ICB4 259 aaPredicted RBP13.14□□□□□ -0.31
CHD4-201ENST00000357008 TMEM167BQ9NRX6 74 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 GPR27Q9NS67 375 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 SLX4Q8IY92 1834 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 MAP1BP46821 2468 aaKnown RBP13.14□□□□□ -0.31
CHD4-201ENST00000357008 MYH14Q7Z406 1995 aaKnown RBP13.14□□□□□ -0.31
CHD4-201ENST00000357008 GNB2P62879 340 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 IFITM3Q01628 133 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 LHX8Q68G74 356 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 Q6ZN92 141 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 VASH2Q86V25 355 aa13.14□□□□□ -0.31
CHD4-201ENST00000357008 CHST1O43916 411 aa13.13□□□□□ -0.31
CHD4-201ENST00000357008 MYF5P13349 255 aa13.13□□□□□ -0.31
CHD4-201ENST00000357008 CD81P60033 236 aa13.13□□□□□ -0.31
CHD4-201ENST00000357008 KHDC1LQ5JSQ8 128 aa13.13□□□□□ -0.31
CHD4-201ENST00000357008 VWA1Q6PCB0 445 aa13.13□□□□□ -0.31
CHD4-201ENST00000357008 LILRA6Q6PI73 481 aa13.13□□□□□ -0.31
CHD4-201ENST00000357008 CARFQ8N187 725 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms