RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 OR2T2Q6IF00 324 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 NKAIN3Q8N8D7 197 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 KLF14Q8TD94 323 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-201ENST00000343575 NPRL2Q8WTW4 380 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 CA5BP1Q8WTZ4 195 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 MS4A7Q9GZW8 240 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-201ENST00000343575 KCNK15Q9H427 330 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 IFT22Q9H7X7 185 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 CNTD2Q9H8S5 307 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 STEAP1Q9UHE8 339 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 PLCE1Q9P212 2302 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 IGKV1-27A0A075B6S5 117 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 NRASP01111 189 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 PSG7Q13046 419 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 MOB3CQ70IA8 216 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 WFDC8Q8IUA0 241 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 TNFAIP8L1Q8WVP5 186 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 ITLN2Q8WWU7 325 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-201ENST00000343575 LRRC46Q96FV0 321 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 NKX6-2Q9C056 277 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-201ENST00000343575 OPA3Q9H6K4 179 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 HCFC1P51610 2035 aa12.57□□□□□ -0.4
CXCL12-201ENST00000343575 RAB19A4D1S5 217 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 GGT3PA6NGU5 568 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 POM121CA8CG34 1229 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 NUDT19A8MXV4 375 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 OR2F2O95006 317 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 CST4P01036 141 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 AKAIN1P0CW23 69 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 VSIG10L2P0DP72 767 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 RAC2P15153 192 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 H2BFSP57053 126 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 OR2F1Q13607 317 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 BIVMQ86UB2 503 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 JAGN1Q8N5M9 183 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 BHLHE23Q8NDY6 225 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 OR51D1Q8NGF3 324 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 PIGCQ92535 297 aa12.56□□□□□ -0.4
CXCL12-201ENST00000343575 C1orf147Q96MC9 270 aaPredicted RBP12.56□□□□□ -0.4
CXCL12-201ENST00000343575 ZNF850A8MQ14 1090 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 H3BUI4 141 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 GOSR2O14653 212 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 KDM4BO94953 1096 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 HTR2CP28335 458 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 ZNF93P35789 620 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-201ENST00000343575 SRSF4Q08170 494 aaKnown RBP12.55□□□□□ -0.4
CXCL12-201ENST00000343575 KISS1Q15726 138 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 PCGF3Q3KNV8 242 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 OR10K1Q8NGX5 313 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 LILRB1Q8NHL6 650 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-201ENST00000343575 LINC01560Q8TB33 94 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 HPSE2Q8WWQ2 592 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 ST8SIA2Q92186 375 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 PIGTQ969N2 578 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 BCL2L14Q9BZR8 327 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 KCNJ16Q9NPI9 418 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 ZNF462Q96JM2 2506 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 KANTRA0A1W2PQU2 76 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 SULT1C2O00338 296 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 LDLRAD4O15165 306 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 CD8AP01732 235 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 CRYAAP02489 173 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 RLN1P04808 185 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 SLC25A4P12235 298 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 C2orf76Q3KRA6 126 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 C11orf88Q6PI97 169 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 C1QL2Q7Z5L3 287 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 KCNRGQ8N5I3 272 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 CSNK2A3Q8NEV1 391 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 OR4C16Q8NGL9 310 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 DVL3Q92997 716 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-201ENST00000343575 FAM3DQ96BQ1 224 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 FOXRED1Q96CU9 486 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-201ENST00000343575 SLC25A21Q9BQT8 299 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-201ENST00000343575 UQCC2Q9BRT2 126 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 TAS2R3Q9NYW6 316 aa12.55□□□□□ -0.4
CXCL12-201ENST00000343575 ROS1P08922 2347 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 ZNF98A6NK75 572 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 ERCC1P07992 297 aaPredicted RBP12.54□□□□□ -0.4
CXCL12-201ENST00000343575 HCKP08631 526 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 OR3A4PP47883 348 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 POU3F4P49335 361 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 EFNB2P52799 333 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 ACTBP60709 375 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 ACTG1P63261 375 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 QRFPP83859 136 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 DEFA5Q01523 94 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 BSPH1Q075Z2 132 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 PRDX4Q13162 271 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 RAB11BQ15907 218 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 MBNL2Q5VZF2 373 aaKnown RBP12.54□□□□□ -0.4
CXCL12-201ENST00000343575 LIN54Q6MZP7 749 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 MUC20Q8N307 709 aaPredicted RBP12.54□□□□□ -0.4
CXCL12-201ENST00000343575 TMEM171Q8WVE6 324 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 PAPOLGQ9BWT3 736 aaKnown RBP12.54□□□□□ -0.4
CXCL12-201ENST00000343575 ZNF107Q9UII5 783 aaPredicted RBP12.54□□□□□ -0.4
CXCL12-201ENST00000343575 FZR1Q9UM11 496 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 ICE1Q9Y2F5 2266 aa12.54□□□□□ -0.4
CXCL12-201ENST00000343575 PQLC2LA1A4F0 135 aa12.53□□□□□ -0.4
CXCL12-201ENST00000343575 IQCF6A8MYZ5 107 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms