RNA–Protein interactions for RNA: ENST00000639002.1

CD44-239, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-239ENST00000639002 HCCSP53701 268 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 CDKN2DP55273 166 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 AP3S2P59780 193 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 RPL10AP62906 217 aaKnown RBP1.49□□□□□ -2.17
CD44-239ENST00000639002 PAFAH1B2P68402 229 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 SLC25A11Q02978 314 aaKnown RBP1.49□□□□□ -2.17
CD44-239ENST00000639002 MXD1Q05195 221 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 PRKCDQ05655 676 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 KDSRQ06136 332 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 TPBGQ13641 420 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 SPA17Q15506 151 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 TMEM249Q2WGJ8 235 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 SLC36A2Q495M3 483 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 TTMPQ5BVD1 217 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 HBMQ6B0K9 141 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 C12orf54Q6X4T0 127 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 MBOAT2Q6ZWT7 520 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 LRRC34Q8IZ02 419 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 CA13Q8N1Q1 262 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 TMEM251Q8N6I4 163 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 UBAC2Q8NBM4 344 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 CHST4Q8NCG5 386 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 C19orf18Q8NEA5 215 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 LFNGQ8NES3 379 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 SFXN5Q8TD22 340 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 RORBQ92753 470 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 OTUB2Q96DC9 234 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 SEH1LQ96EE3 360 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 ZNF75AQ96N20 296 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 RSG1Q9BU20 258 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 POTEKPQ9BYX7 375 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 REEP1Q9H902 201 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 EDA2RQ9HAV5 297 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 ABCB9Q9NP78 766 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 IFT46Q9NQC8 304 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 MAT2BQ9NZL9 334 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 COMMD9Q9P000 198 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 ZNF230Q9UIE0 474 aaPredicted RBP1.49□□□□□ -2.17
CD44-239ENST00000639002 C3orf18Q9UK00 162 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 CES1P1Q9UKY3 287 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 SCML1Q9UN30 329 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 ST3GAL6Q9Y274 331 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 AP3M1Q9Y2T2 418 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 KCNE3Q9Y6H6 103 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 USH1CQ9Y6N9 552 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 V9GYQ6 96 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 CHD6Q8TD26 2715 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 ADGRL1O94910 1474 aa1.49□□□□□ -2.17
CD44-239ENST00000639002 ZCCHC6Q5VYS8 1495 aaKnown RBP1.49□□□□□ -2.17
CD44-239ENST00000639002 HELZ2Q9BYK8 2649 aaKnown RBP1.49□□□□□ -2.17
CD44-239ENST00000639002 PIEZO1Q92508 2521 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 MAP3K5Q99683 1374 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 COL22A1Q8NFW1 1626 aaPredicted RBP1.48□□□□□ -2.17
CD44-239ENST00000639002 ABCA12Q86UK0 2595 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 ANKRD65E5RJM6 399 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 FTCDNL1E5RQL4 147 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 K7EN84 100 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 M0QXV9 152 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 M0QZ92 97 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 LGALS9O00182 355 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 NME4O00746 187 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 PFDN6O15212 129 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 SLC31A1O15431 190 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 CHST10O43529 356 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 CYTH3O43739 400 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 HPGDSO60760 199 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 UPK1BO75841 260 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 AQP8O94778 261 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 SEMA3DO95025 777 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 YIF1AO95070 293 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 CCNE2O96020 404 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 HLA-DQA1P01909 254 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 APCSP02743 223 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 ORM1P02763 201 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 RLN2P04090 185 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 IFNA6P05013 189 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 EIF4EP06730 217 aaKnown RBP1.48□□□□□ -2.17
CD44-239ENST00000639002 GP1BAP07359 652 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 OR5AL1P0C617 328 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 C1GALT1C1LP0DN25 315 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 HSPD1P10809 573 aaKnown RBP1.48□□□□□ -2.17
CD44-239ENST00000639002 PSKH1P11801 424 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 HIST1H1CP16403 213 aaKnown RBP1.48□□□□□ -2.17
CD44-239ENST00000639002 HLA-GP17693 338 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 TCP1P17987 556 aaKnown RBP1.48□□□□□ -2.17
CD44-239ENST00000639002 PSMB9P28065 219 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 TALDO1P37837 337 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 MAGEA3P43357 314 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 TGM4P49221 684 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 TUFMP49411 452 aaKnown RBP1.48□□□□□ -2.17
CD44-239ENST00000639002 SERPINB8P50452 374 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 RPL14P50914 215 aaKnown RBP1.48□□□□□ -2.17
CD44-239ENST00000639002 ZNF121P58317 390 aaPredicted RBP1.48□□□□□ -2.17
CD44-239ENST00000639002 RAB8AP61006 207 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 B2MP61769 119 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 PPP1CBP62140 327 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 SEMG2Q02383 582 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 GLO1Q04760 184 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 RAB31Q13636 194 aa1.48□□□□□ -2.17
CD44-239ENST00000639002 TRAM1Q15629 374 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms