RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 A0A0D9SG52 128 aa11.73□□□□□ -0.53
NEK3-205ENST00000610828 PQLC2LA1A4F0 135 aa11.73□□□□□ -0.53
NEK3-205ENST00000610828 RRP8O43159 456 aaKnown RBP11.73□□□□□ -0.53
NEK3-205ENST00000610828 LRP3O75074 770 aa11.73□□□□□ -0.53
NEK3-205ENST00000610828 ADAP1O75689 374 aa11.73□□□□□ -0.53
NEK3-205ENST00000610828 OR5H8P0DN80 308 aa11.73□□□□□ -0.53
NEK3-205ENST00000610828 DTYMKP23919 212 aa11.73□□□□□ -0.53
NEK3-205ENST00000610828 SURF2Q15527 256 aaPredicted RBP11.73□□□□□ -0.53
NEK3-205ENST00000610828 RFPL4BQ6ZWI9 263 aa11.73□□□□□ -0.53
NEK3-205ENST00000610828 OR6K3Q8NGY3 331 aa11.73□□□□□ -0.53
NEK3-205ENST00000610828 WBP1Q96G27 269 aa11.73□□□□□ -0.53
NEK3-205ENST00000610828 ZNF442Q9H7R0 627 aa11.73□□□□□ -0.53
NEK3-205ENST00000610828 SS18L1O75177 396 aaPredicted RBP11.72□□□□□ -0.53
NEK3-205ENST00000610828 PDCD6O75340 191 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 B3GALNT1O75752 331 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 ANKRD55Q3KP44 614 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 CEACAM21Q3KPI0 293 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 BEX5Q5H9J7 111 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 TOR2AQ5JU69 321 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 SLC51BQ86UW2 128 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 MED12LQ86YW9 2145 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 GCNT2Q8N0V5 402 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 SCARB1Q8WTV0 552 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 NANOS1Q8WY41 292 aaKnown RBP11.72□□□□□ -0.53
NEK3-205ENST00000610828 SLAMF9Q96A28 289 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 FGF23Q9GZV9 251 aaPredicted RBP11.72□□□□□ -0.53
NEK3-205ENST00000610828 CHMP1AQ9HD42 196 aaPredicted RBP11.72□□□□□ -0.53
NEK3-205ENST00000610828 NECAP2Q9NVZ3 263 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 MBD2Q9UBB5 411 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 TMA7Q9Y2S6 64 aaKnown RBP11.72□□□□□ -0.53
NEK3-205ENST00000610828 ZNF175Q9Y473 711 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 ZNF205O95201 554 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 CRHP06850 196 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 BCL3P20749 454 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 WNT5AP41221 380 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 MDP1Q86V88 176 aa11.72□□□□□ -0.53
NEK3-205ENST00000610828 BCL2L2Q92843 193 aaPredicted RBP11.72□□□□□ -0.53
NEK3-205ENST00000610828 GMPPAQ96IJ6 420 aaPredicted RBP11.72□□□□□ -0.53
NEK3-205ENST00000610828 VRK1Q99986 396 aaPredicted RBP11.72□□□□□ -0.53
NEK3-205ENST00000610828 RNF222A6NCQ9 220 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 TUBAL3A6NHL2 446 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 POM121CA8CG34 1229 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 CD300LBA8K4G0 201 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 MPTX1A8MV57 137 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 ZNF732B4DXR9 585 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 OR2F2O95006 317 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 CST4P01036 141 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 RPS2P15880 293 aaKnown RBP11.71□□□□□ -0.53
NEK3-205ENST00000610828 FUT3P21217 361 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 PSMB6P28072 239 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 ECI1P42126 302 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 OR2F1Q13607 317 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 ZNF345Q14585 488 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 ZNF660Q6AZW8 331 aaPredicted RBP11.71□□□□□ -0.53
NEK3-205ENST00000610828 SLC22A25Q6T423 547 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 KCNRGQ8N5I3 272 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 HIST1H2AAQ96QV6 131 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 NMES1Q9C002 83 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 METTL8Q9H825 291 aaKnown RBP11.71□□□□□ -0.53
NEK3-205ENST00000610828 GP6Q9HCN6 339 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 RAB18Q9NP72 206 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 KIF25Q9UIL4 384 aa11.71□□□□□ -0.53
NEK3-205ENST00000610828 KANTRA0A1W2PQU2 76 aa11.71□□□□□ -0.54
NEK3-205ENST00000610828 WISP2O76076 250 aa11.71□□□□□ -0.54
NEK3-205ENST00000610828 RRASP10301 218 aa11.71□□□□□ -0.54
NEK3-205ENST00000610828 CYCSP99999 105 aaKnown RBP11.71□□□□□ -0.54
NEK3-205ENST00000610828 NSUN5P2Q63ZY6 315 aa11.71□□□□□ -0.54
NEK3-205ENST00000610828 ACOT7LQ6ZUV0 252 aa11.71□□□□□ -0.54
NEK3-205ENST00000610828 INO80EQ8NBZ0 244 aaPredicted RBP11.71□□□□□ -0.54
NEK3-205ENST00000610828 SLC30A7Q8NEW0 376 aa11.71□□□□□ -0.54
NEK3-205ENST00000610828 TOMM40LQ969M1 308 aa11.71□□□□□ -0.54
NEK3-205ENST00000610828 LIME1Q9H400 295 aa11.71□□□□□ -0.54
NEK3-205ENST00000610828 OPA3Q9H6K4 179 aa11.71□□□□□ -0.54
NEK3-205ENST00000610828 C12orf4Q9NQ89 552 aa11.71□□□□□ -0.54
NEK3-205ENST00000610828 FAM86C1Q9NVL1 165 aa11.71□□□□□ -0.54
NEK3-205ENST00000610828 A0A0B4J2A0 478 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 F8VVB4 439 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 F8VWA3 439 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 KCNAB3O43448 404 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 RLN2P04090 185 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 SPINK2P20155 84 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 PTGER4P35408 488 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 DAZAP2Q15038 168 aaPredicted RBP11.7□□□□□ -0.54
NEK3-205ENST00000610828 DEFB109BQ30KR1 87 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 DPPA2Q7Z7J5 298 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 CCDC28AQ8IWP9 274 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 MARS2Q96GW9 593 aaKnown RBP11.7□□□□□ -0.54
NEK3-205ENST00000610828 TRIB1Q96RU8 372 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 ZNF286AQ9HBT8 521 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 SHPKQ9UHJ6 478 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 TNRC6AQ8NDV7 1962 aaKnown RBP11.7□□□□□ -0.54
NEK3-205ENST00000610828 A0A1W2PR80 420 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 ANKRD30BLA7E2S9 258 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 I3L521 148 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 LILRA1O75019 489 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 IFNA2P01563 188 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 IGHG3P01860 377 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 NMBP08949 121 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 HOXB5P09067 269 aa11.7□□□□□ -0.54
NEK3-205ENST00000610828 IL32P24001 234 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms