RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 LAMP3Q9UQV4 416 aa10.92□□□□□ -0.66
SPG7-209ENST00000564047 POLDIP2Q9Y2S7 368 aa10.92□□□□□ -0.66
SPG7-209ENST00000564047 ETV7Q9Y603 341 aa10.92□□□□□ -0.66
SPG7-209ENST00000564047 ACANP16112 2415 aa10.92□□□□□ -0.66
SPG7-209ENST00000564047 IGKV1-12A0A0C4DH73 117 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 A6NLC8 198 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 H7C417 338 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 CDIPTO14735 213 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 SPRY1O43609 319 aaPredicted RBP10.91□□□□□ -0.66
SPG7-209ENST00000564047 SYNGR1O43759 233 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 ANGPTL7O43827 346 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 ZNF780AO75290 641 aaPredicted RBP10.91□□□□□ -0.66
SPG7-209ENST00000564047 PAHP00439 452 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 PLATP00750 562 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 IGKV1D-12P01611 117 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 SNRPBP14678 240 aaKnown RBP10.91□□□□□ -0.66
SPG7-209ENST00000564047 ELK1P19419 428 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 NR4A2P43354 598 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 EIF2B2P49770 351 aaKnown RBP10.91□□□□□ -0.66
SPG7-209ENST00000564047 KRTAP10-9P60411 292 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 CCL8P80075 99 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 GPR176Q14439 515 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 MPPED2Q15777 294 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 C2orf76Q3KRA6 126 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 OR2W3Q7Z3T1 314 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 C19orf18Q8NEA5 215 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 VRK1Q99986 396 aaPredicted RBP10.91□□□□□ -0.66
SPG7-209ENST00000564047 CACNG6Q9BXT2 260 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 RAB1BQ9H0U4 201 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 C11orf54Q9H0W9 315 aaPredicted RBP10.91□□□□□ -0.66
SPG7-209ENST00000564047 METTL9Q9H1A3 318 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 SAP30LQ9HAJ7 183 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 RHOFQ9HBH0 211 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 PCDHB16Q9NRJ7 776 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 DECR2Q9NUI1 292 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 IL36GQ9NZH8 169 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 EXTL2Q9UBQ6 330 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 FBLN5Q9UBX5 448 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 OR5V1Q9UGF6 321 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 SPATA2Q9UM82 520 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 VPS13CQ709C8 3753 aa10.91□□□□□ -0.66
SPG7-209ENST00000564047 A0A0B4J203 849 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 IGHV3-64DA0A0J9YX35 117 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 TMEM14DPA8MWL7 114 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 LDLRAD4O15165 306 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 PLA2G10O15496 165 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 TPD52L2O43399 206 aaKnown RBP10.9□□□□□ -0.66
SPG7-209ENST00000564047 NOS1APO75052 506 aaPredicted RBP10.9□□□□□ -0.66
SPG7-209ENST00000564047 KDM4BO94953 1096 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 VSIG8P0DPA2 414 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 CFHR2P36980 270 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 QRFPP83859 136 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 RSU1Q15404 277 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 SPRNQ5BIV9 151 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 PYHIN1Q6K0P9 492 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 WDR82Q6UXN9 313 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 POC1AQ8NBT0 407 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 DUSP18Q8NEJ0 188 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 Q8NFD4 153 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 OR10Z1Q8NGY1 313 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 KCNG3Q8TAE7 436 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 LGALS14Q8TCE9 139 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 Q8TCH9 128 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 NEU4Q8WWR8 484 aaPredicted RBP10.9□□□□□ -0.66
SPG7-209ENST00000564047 IGFBPL1Q8WX77 278 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 SLAMF9Q96A28 289 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 PTX4Q96A99 478 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 CST11Q9H112 138 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 ELL3Q9HB65 397 aaPredicted RBP10.9□□□□□ -0.66
SPG7-209ENST00000564047 GCM1Q9NP62 436 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 UFSP2Q9NUQ7 469 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 RBFOX1Q9NWB1 397 aaKnown RBP10.9□□□□□ -0.66
SPG7-209ENST00000564047 C1orf123Q9NWV4 160 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 MTCH1Q9NZJ7 389 aa10.9□□□□□ -0.66
SPG7-209ENST00000564047 TMEM272A0A1B0GTI8 110 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 TRAPPC2LH3BP13 241 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 OVOL3O00110 214 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 SSX4O60224 188 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 RHBDL1O75783 438 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 CSTBP04080 98 aaKnown RBP10.89□□□□□ -0.67
SPG7-209ENST00000564047 PGA5P0DJD9 388 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 CD99P14209 185 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 RAB6AP20340 208 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 ERVK11-1P61568 191 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 SLC22A6Q4U2R8 563 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 ELP2Q6IA86 826 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 ZNF826PQ6ZT77 177 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 MOGAT3Q86VF5 341 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 Q8IYB0 196 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 OR5H6Q8NGV6 325 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 OR11L1Q8NGX0 322 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 ENKURQ8TC29 256 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 MRPS24Q96EL2 167 aaKnown RBP10.89□□□□□ -0.67
SPG7-209ENST00000564047 NEDD4LQ96PU5 975 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 NRIP2Q9BQI9 281 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 RAB22AQ9UL26 194 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 PPP1R3CQ9UQK1 317 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 ABCA4P78363 2273 aa10.89□□□□□ -0.67
SPG7-209ENST00000564047 RAI1Q7Z5J4 1906 aaPredicted RBP10.88□□□□□ -0.67
SPG7-209ENST00000564047 hCG_1807616A0A1W2PRN6 198 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms