RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 EMG1Q92979 244 aaKnown RBP12.57□□□□□ -0.4
SNX6-205ENST00000555648 MRPL48Q96GC5 212 aaKnown RBP12.57□□□□□ -0.4
SNX6-205ENST00000555648 MYCBPQ99417 103 aaPredicted RBP12.57□□□□□ -0.4
SNX6-205ENST00000555648 MEGF9Q9H1U4 602 aa12.57□□□□□ -0.4
SNX6-205ENST00000555648 ABCB10Q9NRK6 738 aa12.57□□□□□ -0.4
SNX6-205ENST00000555648 PRKACBP22694 351 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 POU3F4P49335 361 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 RBP2P50120 134 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 KRTAP10-3P60369 221 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 ERVK11-1P61568 191 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 EDDM3AQ14507 147 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 ZNF273Q14593 569 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 C2orf68Q2NKX9 166 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 ASPHD2Q6ICH7 369 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 C11orf88Q6PI97 169 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 KCTD20Q7Z5Y7 419 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 ENTHD1Q8IYW4 607 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 OR2T6Q8NHC8 308 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 PYDC1Q8WXC3 89 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 RNFT2Q96EX2 444 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 NPFFR1Q9GZQ6 430 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 NEK6Q9HC98 313 aa12.56□□□□□ -0.4
SNX6-205ENST00000555648 hADV38S2A0JD32 116 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 ARG1P05089 322 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 ZNF728P0DKX0 622 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 GABRR1P24046 479 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 PEX2P28328 305 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 BMXP51813 675 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 MTCP1P56278 107 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 DYNC1I2Q13409 638 aaKnown RBP12.55□□□□□ -0.4
SNX6-205ENST00000555648 MEDAGQ5VYS4 303 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 LIAT1Q6ZQX7 453 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 C10orf67Q8IYJ2 551 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 RDH10Q8IZV5 341 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 PRSS35Q8N3Z0 413 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 PPP1R35Q8TAP8 253 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 FOXRED1Q96CU9 486 aaPredicted RBP12.55□□□□□ -0.4
SNX6-205ENST00000555648 SNX22Q96L94 193 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 NKX3-1Q99801 234 aaPredicted RBP12.55□□□□□ -0.4
SNX6-205ENST00000555648 MTCH1Q9NZJ7 389 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 FBLN5Q9UBX5 448 aa12.55□□□□□ -0.4
SNX6-205ENST00000555648 H3BUI4 141 aa12.54□□□□□ -0.4
SNX6-205ENST00000555648 HAND1O96004 215 aa12.54□□□□□ -0.4
SNX6-205ENST00000555648 HTR1AP08908 422 aa12.54□□□□□ -0.4
SNX6-205ENST00000555648 CSF1P09603 554 aa12.54□□□□□ -0.4
SNX6-205ENST00000555648 ZNF85Q03923 595 aa12.54□□□□□ -0.4
SNX6-205ENST00000555648 MEF2CQ06413 473 aaPredicted RBP12.54□□□□□ -0.4
SNX6-205ENST00000555648 GRK1Q15835 563 aa12.54□□□□□ -0.4
SNX6-205ENST00000555648 FAM189A2Q15884 450 aa12.54□□□□□ -0.4
SNX6-205ENST00000555648 PLA1AQ53H76 456 aa12.54□□□□□ -0.4
SNX6-205ENST00000555648 ZFP1Q6P2D0 407 aa12.54□□□□□ -0.4
SNX6-205ENST00000555648 OR8H2Q8N162 312 aa12.54□□□□□ -0.4
SNX6-205ENST00000555648 DNAAF1Q8NEP3 725 aa12.54□□□□□ -0.4
SNX6-205ENST00000555648 OR2G2Q8NGZ5 317 aa12.54□□□□□ -0.4
SNX6-205ENST00000555648 FAM110DQ8TAY7 271 aaPredicted RBP12.54□□□□□ -0.4
SNX6-205ENST00000555648 ZNF714Q96N38 554 aa12.54□□□□□ -0.4
SNX6-205ENST00000555648 RANBP3Q9H6Z4 567 aaPredicted RBP12.54□□□□□ -0.4
SNX6-205ENST00000555648 TBL2Q9Y4P3 447 aaKnown RBP12.54□□□□□ -0.4
SNX6-205ENST00000555648 PCDHGB5Q9Y5G0 923 aa12.54□□□□□ -0.4
SNX6-205ENST00000555648 IGKV1-27A0A075B6S5 117 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 C17orf98A8MV24 154 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 EI24O14681 340 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 SLC16A6O15403 523 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 ENTPD6O75354 484 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 RBP4P02753 201 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 ATF1P18846 271 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 PAX6P26367 422 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 KIR3DL2P43630 455 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 KIR2DS4P43632 304 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 OR12D2P58182 307 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 HERPUD1Q15011 391 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 ZIK1Q3SY52 487 aaPredicted RBP12.53□□□□□ -0.4
SNX6-205ENST00000555648 PDLIM3Q53GG5 364 aaPredicted RBP12.53□□□□□ -0.4
SNX6-205ENST00000555648 CCDC121Q6ZUS5 278 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 LHFPL2Q6ZUX7 228 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 TRAPPC6BQ86SZ2 158 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 FAM58AQ8N1B3 248 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 C11orf42Q8N5U0 333 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 ACBD7Q8N6N7 88 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 RPS4Y2Q8TD47 263 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 SPSB1Q96BD6 273 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 FGGYQ96C11 551 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 HRASLS5Q96KN8 279 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 HHLA2Q9UM44 414 aa12.53□□□□□ -0.4
SNX6-205ENST00000555648 MEX3AA1L020 520 aaKnown RBP12.52□□□□□ -0.41
SNX6-205ENST00000555648 F8VVB4 439 aa12.52□□□□□ -0.41
SNX6-205ENST00000555648 F8VWA3 439 aa12.52□□□□□ -0.41
SNX6-205ENST00000555648 J3QLW9 94 aa12.52□□□□□ -0.41
SNX6-205ENST00000555648 ZNF737O75373 536 aa12.52□□□□□ -0.41
SNX6-205ENST00000555648 ALPLP05186 524 aa12.52□□□□□ -0.41
SNX6-205ENST00000555648 ZNF19P17023 458 aa12.52□□□□□ -0.41
SNX6-205ENST00000555648 PRKACAP17612 351 aa12.52□□□□□ -0.41
SNX6-205ENST00000555648 AZGP1P25311 298 aaKnown RBP12.52□□□□□ -0.41
SNX6-205ENST00000555648 ALDH3A2P51648 485 aa12.52□□□□□ -0.41
SNX6-205ENST00000555648 SNU13P55769 128 aaKnown RBP12.52□□□□□ -0.41
SNX6-205ENST00000555648 SNRPGP62308 76 aaKnown RBP12.52□□□□□ -0.41
SNX6-205ENST00000555648 ACTA2P62736 377 aa12.52□□□□□ -0.41
SNX6-205ENST00000555648 ACTG2P63267 376 aa12.52□□□□□ -0.41
SNX6-205ENST00000555648 SSX2Q16385 188 aa12.52□□□□□ -0.41
SNX6-205ENST00000555648 ARSJQ5FYB0 599 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms