RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 OR4M1Q8NGD0 313 aa13.93□□□□□ -0.18
SQLE-205ENST00000521232 FGGYQ96C11 551 aa13.93□□□□□ -0.18
SQLE-205ENST00000521232 MRPL48Q96GC5 212 aaKnown RBP13.93□□□□□ -0.18
SQLE-205ENST00000521232 C4orf36Q96KX1 117 aa13.93□□□□□ -0.18
SQLE-205ENST00000521232 ZNF649Q9BS31 505 aa13.93□□□□□ -0.18
SQLE-205ENST00000521232 ZNF696Q9H7X3 374 aa13.93□□□□□ -0.18
SQLE-205ENST00000521232 SEBOXQ9HB31 216 aaPredicted RBP13.93□□□□□ -0.18
SQLE-205ENST00000521232 MRPS18AQ9NVS2 196 aaKnown RBP13.93□□□□□ -0.18
SQLE-205ENST00000521232 MYRFQ9Y2G1 1151 aa13.93□□□□□ -0.18
SQLE-205ENST00000521232 DSCAML1Q8TD84 2053 aa13.93□□□□□ -0.18
SQLE-205ENST00000521232 OR4C45A6NMZ5 311 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 FADS2O95864 444 aaKnown RBP13.92□□□□□ -0.18
SQLE-205ENST00000521232 IGHA1P01876 353 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 ATF1P18846 271 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 ATP1B3P54709 279 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 COL10A1Q03692 680 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 RAB40BQ12829 278 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 ALKBH1Q13686 389 aaKnown RBP13.92□□□□□ -0.18
SQLE-205ENST00000521232 TAF9Q16594 264 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 MIDNQ504T8 468 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 SLC25A26Q70HW3 274 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 MKXQ8IYA7 352 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 SYS1Q8N2H4 156 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 SLAMF9Q96A28 289 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 ALG8Q9BVK2 526 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 AMBNQ9NP70 447 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 INPP5EQ9NRR6 644 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 HHLA2Q9UM44 414 aa13.92□□□□□ -0.18
SQLE-205ENST00000521232 CLPSL1A2RUU4 121 aa13.91□□□□□ -0.18
SQLE-205ENST00000521232 SPRY1O43609 319 aaPredicted RBP13.91□□□□□ -0.18
SQLE-205ENST00000521232 ZNF737O75373 536 aa13.91□□□□□ -0.18
SQLE-205ENST00000521232 PRKACBP22694 351 aa13.91□□□□□ -0.18
SQLE-205ENST00000521232 AZGP1P25311 298 aaKnown RBP13.91□□□□□ -0.18
SQLE-205ENST00000521232 MTCP1P56278 107 aa13.91□□□□□ -0.18
SQLE-205ENST00000521232 PRR31Q5SQ13 230 aa13.91□□□□□ -0.18
SQLE-205ENST00000521232 OLFML2AQ68BL7 652 aa13.91□□□□□ -0.18
SQLE-205ENST00000521232 GDPGP1Q6ZNW5 385 aa13.91□□□□□ -0.18
SQLE-205ENST00000521232 Q8IYB0 196 aa13.91□□□□□ -0.18
SQLE-205ENST00000521232 BEND2Q8NDZ0 799 aa13.91□□□□□ -0.18
SQLE-205ENST00000521232 OR51A4Q8NGJ6 313 aa13.91□□□□□ -0.18
SQLE-205ENST00000521232 OR10AC1Q8NH08 325 aa13.91□□□□□ -0.18
SQLE-205ENST00000521232 SPSB1Q96BD6 273 aa13.91□□□□□ -0.18
SQLE-205ENST00000521232 AJUBAQ96IF1 538 aa13.91□□□□□ -0.18
SQLE-205ENST00000521232 HEXA-AS1Q9H8Q6 139 aa13.91□□□□□ -0.18
SQLE-205ENST00000521232 ISG20L2Q9H9L3 353 aaKnown RBP13.91□□□□□ -0.18
SQLE-205ENST00000521232 hCG_1809904A0A1W2PP81 198 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 A0A1W2PPE2 198 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 A0A1W2PR64 198 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 A0A1W2PRV1 198 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 INMTO95050 263 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 BAG2O95816 211 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 PAHP00439 452 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 MT-ND2P03891 347 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 CCL3L1P16619 93 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 ZNF20P17024 532 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 NPBWR2P48146 333 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 ZNF273Q14593 569 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 LHFPL2Q6ZUX7 228 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 ZSCAN4Q8NAM6 433 aaPredicted RBP13.9□□□□□ -0.18
SQLE-205ENST00000521232 APH1BQ8WW43 257 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 SNX22Q96L94 193 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 RDH12Q96NR8 316 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 MEGF9Q9H1U4 602 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 ERVK13-1Q9NX77 482 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 VPREB3Q9UKI3 123 aa13.9□□□□□ -0.18
SQLE-205ENST00000521232 RPL36Q9Y3U8 105 aaKnown RBP13.9□□□□□ -0.18
SQLE-205ENST00000521232 BTBD17A6NE02 478 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 C17orf98A8MV24 154 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 ANGPTL7O43827 346 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 CYB5AP00167 134 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 RPSAP08865 295 aaKnown RBP13.89□□□□□ -0.19
SQLE-205ENST00000521232 DLX6P56179 175 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 ERVFRD-1P60508 538 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 MRPL28Q13084 256 aaKnown RBP13.89□□□□□ -0.19
SQLE-205ENST00000521232 PDZK1IP1Q13113 114 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 KLHL22Q53GT1 634 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 LPCAT4Q643R3 524 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 OR8H2Q8N162 312 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 ZNF676Q8N7Q3 588 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 ASCC1Q8N9N2 400 aaKnown RBP13.89□□□□□ -0.19
SQLE-205ENST00000521232 OR52I1Q8NGK6 324 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 OR5R1Q8NH85 324 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 LINC01006Q8NI28 216 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 EMG1Q92979 244 aaKnown RBP13.89□□□□□ -0.19
SQLE-205ENST00000521232 OPALINQ96PE5 141 aa13.89□□□□□ -0.19
SQLE-205ENST00000521232 SMPD3Q9NY59 655 aaPredicted RBP13.89□□□□□ -0.19
SQLE-205ENST00000521232 TRBV2A0A0J9YWF9 115 aa13.88□□□□□ -0.19
SQLE-205ENST00000521232 TMEM82A0PJX8 343 aa13.88□□□□□ -0.19
SQLE-205ENST00000521232 ALX3O95076 343 aa13.88□□□□□ -0.19
SQLE-205ENST00000521232 BCL3P20749 454 aa13.88□□□□□ -0.19
SQLE-205ENST00000521232 ZNF146Q15072 292 aa13.88□□□□□ -0.19
SQLE-205ENST00000521232 ZSCAN26Q16670 478 aa13.88□□□□□ -0.19
SQLE-205ENST00000521232 C17orf107Q6ZR85 190 aa13.88□□□□□ -0.19
SQLE-205ENST00000521232 GDPD3Q7L5L3 318 aa13.88□□□□□ -0.19
SQLE-205ENST00000521232 FAM58AQ8N1B3 248 aa13.88□□□□□ -0.19
SQLE-205ENST00000521232 ZNF555Q8NEP9 628 aa13.88□□□□□ -0.19
SQLE-205ENST00000521232 OR13C3Q8NGS6 347 aa13.88□□□□□ -0.19
SQLE-205ENST00000521232 C17orf50Q8WW18 174 aa13.88□□□□□ -0.19
SQLE-205ENST00000521232 WFDC12Q8WWY7 111 aa13.88□□□□□ -0.19
SQLE-205ENST00000521232 FGF20Q9NP95 211 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 283.7 ms