RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 USF3Q68DE3 2245 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 TEX15Q9BXT5 2789 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 ARID1AO14497 2285 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 IGKV1-12A0A0C4DH73 117 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 A0A1B0GVG6 124 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 ANKRD20A5PA0PJZ0 165 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 LRP5LA4QPB2 252 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 ZSCAN5BA6NJL1 495 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 TMEM210A6NLX4 147 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 ZNF732B4DXR9 585 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 H7C417 338 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 PTBP3O95758 552 aaKnown RBP7.24□□□□□ -1.25
VAPB-206ENST00000520497 DHFRP00374 187 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 PLAUP00749 431 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 IGKV1D-12P01611 117 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 ADH4P08319 380 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 OR4A8P0C604 315 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 AKAIN1P0CW23 69 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 TBPP20226 339 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 KIR2DL3P43628 341 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 HAAOP46952 286 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 BCAP31P51572 246 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 TAS2R19P59542 299 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 RPS27AP62979 156 aaKnown RBP7.24□□□□□ -1.25
VAPB-206ENST00000520497 ZNF154Q13106 437 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 PDZK1IP1Q13113 114 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 OR8G1Q15617 311 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 PCGF3Q3KNV8 242 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 ACTBL2Q562R1 376 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 FIP1L1Q6UN15 594 aaKnown RBP7.24□□□□□ -1.25
VAPB-206ENST00000520497 Q6ZTK2 550 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 TMEM200AQ86VY9 491 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 ZNF573Q86YE8 665 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 ZNF611Q8N823 705 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 SPERTQ8NA61 448 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 TMEM104Q8NE00 496 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 Q8NFD4 153 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 OR10AD1Q8NGE0 317 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 OR13G1Q8NGZ3 307 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 FAM222BQ8WU58 562 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 GTF3AQ92664 365 aaKnown RBP7.24□□□□□ -1.25
VAPB-206ENST00000520497 NEUROG1Q92886 237 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 CREB3L1Q96BA8 519 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 GAL3ST1Q99999 423 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 PKIBQ9C010 78 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 SELENOIQ9C0D9 397 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 TLNRD1Q9H1K6 362 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 OR51I2Q9H344 312 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 PLK3Q9H4B4 646 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 MSL2Q9HCI7 577 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 MTFP1Q9UDX5 166 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 DUSP13Q9UII6 198 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 PLEKHA6Q9Y2H5 1048 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 POLDIP2Q9Y2S7 368 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 RBMX2Q9Y388 322 aaKnown RBP7.24□□□□□ -1.25
VAPB-206ENST00000520497 NUBP2Q9Y5Y2 271 aa7.24□□□□□ -1.25
VAPB-206ENST00000520497 SPG11Q96JI7 2443 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 LRBAP50851 2863 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FUOMA2VDF0 154 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FAM90A10PA6NDY2 464 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FAM90A18PA6NE21 464 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FAM90A16PA6NEW6 464 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FAM90A20PA6NIJ5 464 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FAM90A8PA6NJQ4 464 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FAM90A7PA6NKC0 464 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 SERPINE3A8MV23 424 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FAM90A22PA8MWA6 464 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FAM90A12PA8MX19 464 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FAM90A5PA8MXJ8 464 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 VSTM5A8MXK1 200 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FAM90A23PA8MXZ1 464 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 F5H5P2 479 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 TRAPPC2LH3BP13 241 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 J3QT63 122 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 PLA2G10O15496 165 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 AKR7A2O43488 359 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 SPRY1O43609 319 aaPredicted RBP7.23□□□□□ -1.25
VAPB-206ENST00000520497 ANGPTL7O43827 346 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 CA11O75493 328 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 PLATP00750 562 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FAM90A15PP0C7V4 464 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FAM90A13PP0C7W8 464 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FAM90A14PP0C7W9 464 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 FAM90A24PP0C7X0 464 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 HIST1H1DP16402 221 aaKnown RBP7.23□□□□□ -1.25
VAPB-206ENST00000520497 APOBEC3AP31941 199 aaPredicted RBP7.23□□□□□ -1.25
VAPB-206ENST00000520497 CD200P41217 278 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 BTG1P62324 171 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 IL24Q13007 206 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 MAB21L1Q13394 359 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 ARFRP1Q13795 201 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 KLF9Q13886 244 aaPredicted RBP7.23□□□□□ -1.25
VAPB-206ENST00000520497 MEF2DQ14814 521 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 DAZAP2Q15038 168 aaPredicted RBP7.23□□□□□ -1.25
VAPB-206ENST00000520497 EFNB3Q15768 340 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 MST1LQ2TV78 715 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 ZNF672Q499Z4 452 aaPredicted RBP7.23□□□□□ -1.25
VAPB-206ENST00000520497 CDNFQ49AH0 187 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 OLFML2AQ68BL7 652 aa7.23□□□□□ -1.25
VAPB-206ENST00000520497 OR10K2Q6IF99 312 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms