RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 LRP12Q9Y561 859 aa12.71□□□□□ -0.37
SRRT-209ENST00000474896 NOTCH3Q9UM47 2321 aa12.71□□□□□ -0.38
SRRT-209ENST00000474896 PIN1P1O15428 100 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 ZNF254O75437 659 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 RHBDL1O75783 438 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 VSIG10L2P0DP72 767 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 ST3GAL4Q11206 333 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 LRRC75BQ2VPJ9 315 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 RBM48Q5RL73 367 aaKnown RBP12.7□□□□□ -0.38
SRRT-209ENST00000474896 ZNF684Q5T5D7 378 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 CRIP3Q6Q6R5 217 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 REC114Q7Z4M0 266 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 FAM185AQ8N0U4 392 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 LYG1Q8N1E2 194 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 STX19Q8N4C7 294 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 PPP1R14AQ96A00 147 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 LYZL4Q96KX0 146 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 HIST1H2AAQ96QV6 131 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 ZNF649Q9BS31 505 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 ALG8Q9BVK2 526 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 NIPAL2Q9H841 368 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 RAB18Q9NP72 206 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 ABCB9Q9NP78 766 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 PAK1IP1Q9NWT1 392 aaPredicted RBP12.7□□□□□ -0.38
SRRT-209ENST00000474896 ERVK13-1Q9NX77 482 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 MRM2Q9UI43 246 aaKnown RBP12.7□□□□□ -0.38
SRRT-209ENST00000474896 DIMT1Q9UNQ2 313 aaKnown RBP12.7□□□□□ -0.38
SRRT-209ENST00000474896 TPRKBQ9Y3C4 175 aa12.7□□□□□ -0.38
SRRT-209ENST00000474896 IGKV1D-17A0A075B6S4 117 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 PTGES3LE9PB15 166 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 KRT8P05787 483 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 LIMS3P0CW19 117 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 LIMS4P0CW20 117 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 PSG2P11465 335 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 CRHBPP24387 322 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 DCTDP32321 178 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 GPM6AP51674 278 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 RIDAP52758 137 aaKnown RBP12.69□□□□□ -0.38
SRRT-209ENST00000474896 PSMA6P60900 246 aaKnown RBP12.69□□□□□ -0.38
SRRT-209ENST00000474896 ACTA2P62736 377 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 ACTG2P63267 376 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 SLC35A2P78381 396 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 GALEQ14376 348 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 TP53I3Q53FA7 332 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 OXLD1Q5BKU9 147 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 PLEKHG7Q6ZR37 379 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 LHFPL3Q86UP9 236 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 MKXQ8IYA7 352 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 TMEM185AQ8NFB2 350 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 HPSE2Q8WWQ2 592 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 DUSP21Q9H596 190 aa12.69□□□□□ -0.38
SRRT-209ENST00000474896 RANBP3Q9H6Z4 567 aaPredicted RBP12.69□□□□□ -0.38
SRRT-209ENST00000474896 EXOSC1Q9Y3B2 195 aaKnown RBP12.69□□□□□ -0.38
SRRT-209ENST00000474896 TRBV23-1A0A0A0MS06 115 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 METTL15A6NJ78 407 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 SULT1C4O75897 302 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 CDK1P06493 297 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 MYL12AP19105 171 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 C21orf33P30042 268 aaPredicted RBP12.68□□□□□ -0.38
SRRT-209ENST00000474896 ETV1P50549 477 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 CAPZA1P52907 286 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 AANATQ16613 207 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 NSUN5P1Q3KNT7 163 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 FAM220AQ7Z4H9 259 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 ZDHHC23Q8IYP9 409 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 YIPF7Q8N8F6 280 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 ZNF671Q8TAW3 534 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 MRAPQ8TCY5 172 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 SGCDQ92629 289 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 MYDGFQ969H8 173 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 MRPL48Q96GC5 212 aaKnown RBP12.68□□□□□ -0.38
SRRT-209ENST00000474896 MYCBPQ99417 103 aaPredicted RBP12.68□□□□□ -0.38
SRRT-209ENST00000474896 NKX3-1Q99801 234 aaPredicted RBP12.68□□□□□ -0.38
SRRT-209ENST00000474896 NPFFR1Q9GZQ6 430 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 OR51I2Q9H344 312 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 HEXA-AS1Q9H8Q6 139 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 C19orf12Q9NSK7 152 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 GNG8Q9UK08 70 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 ZNF222Q9UK12 451 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 BLOC1S6Q9UL45 172 aa12.68□□□□□ -0.38
SRRT-209ENST00000474896 MEGF11A6BM72 1044 aa12.67□□□□□ -0.38
SRRT-209ENST00000474896 ZNF732B4DXR9 585 aa12.67□□□□□ -0.38
SRRT-209ENST00000474896 CHST1O43916 411 aa12.67□□□□□ -0.38
SRRT-209ENST00000474896 BMXP51813 675 aa12.67□□□□□ -0.38
SRRT-209ENST00000474896 OR12D2P58182 307 aa12.67□□□□□ -0.38
SRRT-209ENST00000474896 LOXL3P58215 753 aa12.67□□□□□ -0.38
SRRT-209ENST00000474896 EMX1Q04741 257 aaPredicted RBP12.67□□□□□ -0.38
SRRT-209ENST00000474896 ZNF829Q3KNS6 432 aaPredicted RBP12.67□□□□□ -0.38
SRRT-209ENST00000474896 DMRTC1Q5HYR2 192 aa12.67□□□□□ -0.38
SRRT-209ENST00000474896 SYS1Q8N2H4 156 aa12.67□□□□□ -0.38
SRRT-209ENST00000474896 DTX3Q8N9I9 347 aa12.67□□□□□ -0.38
SRRT-209ENST00000474896 PIFOQ8TCI5 191 aa12.67□□□□□ -0.38
SRRT-209ENST00000474896 C4orf36Q96KX1 117 aa12.67□□□□□ -0.38
SRRT-209ENST00000474896 FAM206AQ9NX38 181 aa12.67□□□□□ -0.38
SRRT-209ENST00000474896 CHCHD3Q9NX63 227 aaKnown RBP12.67□□□□□ -0.38
SRRT-209ENST00000474896 CLEC2DQ9UHP7 191 aa12.67□□□□□ -0.38
SRRT-209ENST00000474896 TMEM269A0A1B0GVZ9 245 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 J3QLW9 94 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 RGS10O43665 173 aa12.66□□□□□ -0.38
SRRT-209ENST00000474896 SRSF10O75494 262 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms