RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 SERINC4A6NH21 518 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 ZNF814B7Z6K7 855 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 HMGB3O15347 200 aaKnown RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 GALR3O60755 368 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 PRAF2O60831 178 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 ZNF217O75362 1048 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 EML2O95834 649 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 CFDP00746 253 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 NRASP01111 189 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 MBPP02686 304 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 NGFRP08138 427 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 OR4Q2P0C623 313 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 GZMBP10144 247 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 VPREB1P12018 145 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 HSD17B1P14061 328 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 CHRNB2P17787 502 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 PRKACGP22612 351 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 GCSHP23434 173 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 NMBRP28336 390 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 NBL1P41271 181 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 GLP1RP43220 463 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 KIR2DS4P43632 304 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 GPR6P46095 362 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 GSK3BP49841 420 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 KLK7P49862 253 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 RPS15AP62244 130 aaKnown RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 BTG1P62324 171 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 PITX1P78337 314 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 CFHR1Q03591 330 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 ZNF415Q09FC8 603 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 FHL3Q13643 280 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 RUNX3Q13761 415 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 RNPS1Q15287 305 aaKnown RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 IL17AQ16552 155 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 HIST3H3Q16695 136 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 IAH1Q2TAA2 248 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 ZNF284Q2VY69 593 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 ATP6AP1LQ52LC2 224 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 VWA2Q5GFL6 755 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 ALG10BQ5I7T1 473 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 C1orf220Q5T0J3 134 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 TEDDM1Q5T9Z0 273 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 ZFAND6Q6FIF0 208 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 GJB7Q6PEY0 223 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 Q6ZSR9 355 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 TSEN54Q7Z6J9 526 aaKnown RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 CALHM3Q86XJ0 350 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 GPSM1Q86YR5 675 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 CMTM1Q8IZ96 169 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 UMODL1-AS1Q8N2C9 162 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 MUC20Q8N307 709 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 MUC15Q8N387 334 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 SPEM1Q8N4L4 309 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 PARP16Q8N5Y8 322 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 POC1AQ8NBT0 407 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 RNF149Q8NC42 400 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 DUSP18Q8NEJ0 188 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 TSTD1Q8NFU3 115 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 OR4K1Q8NGD4 311 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 OR52I1Q8NGK6 324 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 OR1N2Q8NGR9 330 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 OR1J2Q8NGS2 313 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 OR4F5Q8NH21 305 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 SFXN5Q8TD22 340 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 NUS1Q96E22 293 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 DYNLL2Q96FJ2 89 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 HSPB9Q9BQS6 159 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 MIEN1Q9BRT3 115 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 EFCAB11Q9BUY7 163 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 C1QTNF6Q9BXI9 259 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 SEC11CQ9BY50 192 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 OR51J1Q9H342 316 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 FNDC4Q9H6D8 234 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 EXOSC4Q9NPD3 245 aaKnown RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 CBLN4Q9NTU7 201 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 LYRM2Q9NU23 88 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 TAS2R16Q9NYV7 291 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 KIAA1456Q9P272 454 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 POMT2Q9UKY4 750 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 HS3ST2Q9Y278 367 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 RPL36Q9Y3U8 105 aaKnown RBP4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 HTTP42858 3142 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 PTPRFP10586 1907 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 LAMB2P55268 1798 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 DLEC1Q9Y238 1755 aa4.07□□□□□ -1.76
HMGB3P9-201ENST00000441799 THSD7BQ9C0I4 1608 aa4.06□□□□□ -1.76
HMGB3P9-201ENST00000441799 CENPFP49454 3210 aa4.06□□□□□ -1.76
HMGB3P9-201ENST00000441799 MYH7BA7E2Y1 1941 aa4.06□□□□□ -1.76
HMGB3P9-201ENST00000441799 BAZ2AQ9UIF9 1905 aaKnown RBP4.06□□□□□ -1.76
HMGB3P9-201ENST00000441799 MYH4Q9Y623 1939 aa4.06□□□□□ -1.76
HMGB3P9-201ENST00000441799 A0A1B0GX51 115 aa4.06□□□□□ -1.76
HMGB3P9-201ENST00000441799 A0A1W2PP18 115 aa4.06□□□□□ -1.76
HMGB3P9-201ENST00000441799 OR5B21A6NL26 309 aa4.06□□□□□ -1.76
HMGB3P9-201ENST00000441799 F5H6K3 240 aa4.06□□□□□ -1.76
HMGB3P9-201ENST00000441799 SIRPB1O00241 398 aa4.06□□□□□ -1.76
HMGB3P9-201ENST00000441799 OR7C1O76099 320 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P9-201ENST00000441799 AMY1AP04745 511 aa4.06□□□□□ -1.76
HMGB3P9-201ENST00000441799 HPNP05981 417 aa4.06□□□□□ -1.76
HMGB3P9-201ENST00000441799 DBIP07108 87 aaKnown RBP4.06□□□□□ -1.76
HMGB3P9-201ENST00000441799 GRPP07492 148 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms