RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ZNF416Q9BWM5 594 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 TBL1XR1Q9BZK7 514 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 LAT2Q9GZY6 243 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 BEX1Q9HBH7 125 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 IFT46Q9NQC8 304 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 ZFP57Q9NU63 452 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 PIPOXQ9P0Z9 390 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 KLK11Q9UBX7 282 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 HHLA2Q9UM44 414 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 FLVCR2Q9UPI3 526 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 PRELID3BQ9Y3B1 194 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 NOP16Q9Y3C1 178 aaKnown RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 TEX13DA0A0J9YY54 714 aaPredicted RBP4.29□□□□□ -1.72
LINC00458-202ENST00000427299 LOC390937A0A1W2PQ73 354 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CIB4A0PJX0 185 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 PRSS37A4D1T9 235 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 TMEM178BH3BS89 294 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 ZNHIT1O43257 154 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 HCRTR1O43613 425 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 FCGR3BO75015 233 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 WDR1O75083 606 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 MTRF1O75570 445 aaKnown RBP4.29□□□□□ -1.72
LINC00458-202ENST00000427299 UTS2O95399 124 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 KLF8O95600 359 aaPredicted RBP4.29□□□□□ -1.72
LINC00458-202ENST00000427299 SEMA4FO95754 770 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 EML2O95834 649 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CFDP00746 253 aaPredicted RBP4.29□□□□□ -1.72
LINC00458-202ENST00000427299 IGKV1D-16P01601 117 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 BGLAPP02818 100 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CD74P04233 296 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 ISG15P05161 165 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 HOXD4P09016 255 aaPredicted RBP4.29□□□□□ -1.72
LINC00458-202ENST00000427299 OR4E1P0C645 316 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CT45A8P0DMV1 189 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CT45A9P0DMV2 189 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 TPT1P13693 172 aaKnown RBP4.29□□□□□ -1.72
LINC00458-202ENST00000427299 PVRP15151 417 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 RAB3AP20336 220 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 TIMP3P35625 211 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CDKN1AP38936 164 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 AQP2P41181 271 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 PPICP45877 212 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CBX5P45973 191 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CX3CR1P49238 355 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CLDN12P56749 244 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 SLC26A5P58743 744 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CD81P60033 236 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 RPL27P61353 136 aaKnown RBP4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CYCSP99999 105 aaKnown RBP4.29□□□□□ -1.72
LINC00458-202ENST00000427299 PLCXD2Q0VAA5 305 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 SLC17A1Q14916 467 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 ARL6IP1Q15041 203 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 ELOCQ15369 112 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 TSC22D1Q15714 1073 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CT45A2Q5DJT8 189 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 TMEM255AQ5JRV8 349 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 WDR38Q5JTN6 314 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 TEX30Q5JUR7 227 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 TMEM244Q5VVB8 128 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 TMEM225Q6GV28 225 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 RTL6Q6ICC9 239 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 EIF5AL1Q6IS14 154 aaKnown RBP4.29□□□□□ -1.72
LINC00458-202ENST00000427299 PRR27Q6MZM9 219 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 FAAP20Q6NZ36 180 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 TMEM184AQ6ZMB5 413 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 ACOT7LQ6ZUV0 252 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 PRSS41Q7RTY9 318 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 SLC36A1Q7Z2H8 476 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 DPY19L4Q7Z388 723 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 OR2W3Q7Z3T1 314 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 GRINAQ7Z429 371 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 LYG2Q86SG7 212 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CATSPERDQ86XM0 798 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 GKN2Q86XP6 184 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 KMT5CQ86Y97 462 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 KRTAP7-1Q8IUC3 87 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 SERPINA12Q8IW75 414 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 SPAG16Q8N0X2 631 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 SVBPQ8N300 66 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 KCNRGQ8N5I3 272 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 ZNF248Q8NDW4 579 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 OR51S1Q8NGJ8 323 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 OR5M1Q8NGP8 315 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 OR1J4Q8NGS1 313 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 OR13C3Q8NGS6 347 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 OR9A4Q8NGU2 314 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 OR10K1Q8NGX5 313 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 OR1S1Q8NH92 325 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 STOML3Q8TAV4 291 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 ZPLD1Q8TCW7 415 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 TMEM234Q8WY98 164 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 DAZLQ92904 295 aaKnown RBP4.29□□□□□ -1.72
LINC00458-202ENST00000427299 ARL11Q969Q4 196 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 TSACCQ96A04 125 aaPredicted RBP4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CXorf58Q96LI9 332 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 LINC00052Q96N35 136 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 ZNF285Q96NJ3 590 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 LPAR4Q99677 370 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 UQCC2Q9BRT2 126 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 ATG5Q9H1Y0 275 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms