RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 TMEM82A0PJX8 343 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 OR2T7P0C7T2 308 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 LGALS4P56470 323 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 ZNF85Q03923 595 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 EDDM3AQ14507 147 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 C2orf68Q2NKX9 166 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 SLC25A26Q70HW3 274 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 KLHDC1Q8N7A1 406 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 TPRX1Q8N7U7 411 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 OR4C13Q8NGP0 309 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 CEP19Q96LK0 163 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 GABARAPL3Q9BY60 117 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 GNG8Q9UK08 70 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 SLC7A11Q9UPY5 501 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 C17orf98A8MV24 154 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 IGHA1P01876 353 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 ARG1P05089 322 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 CSF1P09603 554 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 DUSP1P28562 367 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 ATP6V1E1P36543 226 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 SNU13P55769 128 aaKnown RBP13.42□□□□□ -0.26
PTPRK-208ENST00000392449 CCBE1Q6UXH8 406 aaPredicted RBP13.42□□□□□ -0.26
PTPRK-208ENST00000392449 TMEM219Q86XT9 240 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 LYG1Q8N1E2 194 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 CHST5Q9GZS9 411 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 CHST6Q9GZX3 395 aa13.42□□□□□ -0.26
PTPRK-208ENST00000392449 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTPRK-208ENST00000392449 FAM90A8PA6NJQ4 464 aa13.41□□□□□ -0.26
PTPRK-208ENST00000392449 VSIG10L2P0DP72 767 aa13.41□□□□□ -0.26
PTPRK-208ENST00000392449 KIR2DS4P43632 304 aa13.41□□□□□ -0.26
PTPRK-208ENST00000392449 NPBWR2P48146 333 aa13.41□□□□□ -0.26
PTPRK-208ENST00000392449 HERPUD1Q15011 391 aa13.41□□□□□ -0.26
PTPRK-208ENST00000392449 ADAT3Q96EY9 351 aaPredicted RBP13.41□□□□□ -0.26
PTPRK-208ENST00000392449 OSBPL10Q9BXB5 764 aa13.41□□□□□ -0.26
PTPRK-208ENST00000392449 RBFOX1Q9NWB1 397 aaKnown RBP13.41□□□□□ -0.26
PTPRK-208ENST00000392449 IGKV1-9A0A0C4DH69 117 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 hCG_1809904A0A1W2PP81 198 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 A0A1W2PPE2 198 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 A0A1W2PR64 198 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 A0A1W2PRV1 198 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 ODF3BA8MYP8 253 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 SULT1C4O75897 302 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 CHRM2P08172 466 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 ZNF728P0DKX0 622 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 BCL3P20749 454 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 POU3F4P49335 361 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 FUT6P51993 359 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 ISL1P61371 349 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 FAM189A2Q15884 450 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 SSX2Q16385 188 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 AANATQ16613 207 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 Q6ZTK2 550 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 GDPD3Q7L5L3 318 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 RNF144BQ7Z419 303 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 EGFL6Q8IUX8 553 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 OR8H2Q8N162 312 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 OR52N4Q8NGI2 321 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 OR8J1Q8NGP2 316 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 OR2T6Q8NHC8 308 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 EMG1Q92979 244 aaKnown RBP13.4□□□□□ -0.26
PTPRK-208ENST00000392449 BORCS8Q96FH0 119 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 CENPNQ96H22 339 aaPredicted RBP13.4□□□□□ -0.26
PTPRK-208ENST00000392449 ADI1Q9BV57 179 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 ZNF702PQ9H963 129 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 AASSQ9UDR5 926 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 ENOPH1Q9UHY7 261 aa13.4□□□□□ -0.26
PTPRK-208ENST00000392449 PSPNO60542 156 aa13.39□□□□□ -0.27
PTPRK-208ENST00000392449 GATBO75879 557 aaKnown RBP13.39□□□□□ -0.27
PTPRK-208ENST00000392449 HAND1O96004 215 aa13.39□□□□□ -0.27
PTPRK-208ENST00000392449 IGHV1-8P0DP01 117 aa13.39□□□□□ -0.27
PTPRK-208ENST00000392449 FCGR1AP12314 374 aa13.39□□□□□ -0.27
PTPRK-208ENST00000392449 NANOS3P60323 173 aaKnown RBP13.39□□□□□ -0.27
PTPRK-208ENST00000392449 DYNC1I2Q13409 638 aaKnown RBP13.39□□□□□ -0.27
PTPRK-208ENST00000392449 OR10AC1Q8NH08 325 aa13.39□□□□□ -0.27
PTPRK-208ENST00000392449 PYDC1Q8WXC3 89 aa13.39□□□□□ -0.27
PTPRK-208ENST00000392449 RFT1Q96AA3 541 aa13.39□□□□□ -0.27
PTPRK-208ENST00000392449 NPFFR1Q9GZQ6 430 aa13.39□□□□□ -0.27
PTPRK-208ENST00000392449 G3V4G9 280 aa13.38□□□□□ -0.27
PTPRK-208ENST00000392449 ENTPD6O75354 484 aa13.38□□□□□ -0.27
PTPRK-208ENST00000392449 GABRR1P24046 479 aa13.38□□□□□ -0.27
PTPRK-208ENST00000392449 ZNF626Q68DY1 528 aa13.38□□□□□ -0.27
PTPRK-208ENST00000392449 BAIAP2L2Q6UXY1 529 aa13.38□□□□□ -0.27
PTPRK-208ENST00000392449 FAM220AQ7Z4H9 259 aa13.38□□□□□ -0.27
PTPRK-208ENST00000392449 OR13D1Q8NGV5 346 aa13.38□□□□□ -0.27
PTPRK-208ENST00000392449 OR2G2Q8NGZ5 317 aa13.38□□□□□ -0.27
PTPRK-208ENST00000392449 CFHR4Q92496 578 aa13.38□□□□□ -0.27
PTPRK-208ENST00000392449 ZNF714Q96N38 554 aa13.38□□□□□ -0.27
PTPRK-208ENST00000392449 RANBP3Q9H6Z4 567 aaPredicted RBP13.38□□□□□ -0.27
PTPRK-208ENST00000392449 RAB18Q9NP72 206 aa13.38□□□□□ -0.27
PTPRK-208ENST00000392449 FRRS1LQ9P0K9 344 aa13.38□□□□□ -0.27
PTPRK-208ENST00000392449 TCF19Q9Y242 345 aa13.38□□□□□ -0.27
PTPRK-208ENST00000392449 VGLL3A8MV65 326 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 MMP23AO75900 390 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 UBCP0CG48 685 aaKnown RBP13.37□□□□□ -0.27
PTPRK-208ENST00000392449 RASSF2P50749 326 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 OR12D2P58182 307 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 ACTA2P62736 377 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 ACTG2P63267 376 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 ACTC1P68032 377 aa13.37□□□□□ -0.27
PTPRK-208ENST00000392449 ACTA1P68133 377 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms