RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ST6GALNAC2Q9UJ37 374 aa17.52■□□□□ 0.39
SHANK1-203ENST00000391813 FUT7Q11130 342 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 TCTN1Q2MV58 587 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 BHLHE23Q8NDY6 225 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 PTX4Q96A99 478 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 FCN1O00602 326 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 MUC1P15941 1255 aaPredicted RBP17.51■□□□□ 0.39
SHANK1-203ENST00000391813 NXPH1P58417 271 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 DMRT1Q9Y5R6 373 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 MKRN2OSH3BPM6 223 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 VSIG10L2P0DP72 767 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 SLC38A11Q08AI6 406 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 ATP6V1FQ16864 119 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 FAM122AQ96E09 287 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 CCDC74BQ96LY2 380 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 VN1R1Q9GZP7 353 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 DSPPQ9NZW4 1301 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 TERTO14746 1132 aaKnown RBP17.51■□□□□ 0.39
SHANK1-203ENST00000391813 ACAA1P09110 424 aaPredicted RBP17.51■□□□□ 0.39
SHANK1-203ENST00000391813 TBC1D28Q2M2D7 210 aa17.51■□□□□ 0.39
SHANK1-203ENST00000391813 ADAT1Q9BUB4 502 aaKnown RBP17.51■□□□□ 0.39
SHANK1-203ENST00000391813 ANKRD34CP0C6C1 535 aa17.5■□□□□ 0.39
SHANK1-203ENST00000391813 CRISP2P16562 243 aa17.5■□□□□ 0.39
SHANK1-203ENST00000391813 EPHA8P29322 1005 aaPredicted RBP17.5■□□□□ 0.39
SHANK1-203ENST00000391813 CNN1P51911 297 aaKnown RBP17.5■□□□□ 0.39
SHANK1-203ENST00000391813 FAM3AP98173 230 aa17.5■□□□□ 0.39
SHANK1-203ENST00000391813 ZDHHC23Q8IYP9 409 aa17.5■□□□□ 0.39
SHANK1-203ENST00000391813 EDARADDQ8WWZ3 215 aa17.5■□□□□ 0.39
SHANK1-203ENST00000391813 VAX2Q9UIW0 290 aa17.5■□□□□ 0.39
SHANK1-203ENST00000391813 R4GN57 208 aa17.5■□□□□ 0.39
SHANK1-203ENST00000391813 DHRS3O75911 302 aa17.5■□□□□ 0.39
SHANK1-203ENST00000391813 GPR12P47775 334 aa17.5■□□□□ 0.39
SHANK1-203ENST00000391813 AMTP48728 403 aa17.5■□□□□ 0.39
SHANK1-203ENST00000391813 SDHCQ99643 169 aaPredicted RBP17.5■□□□□ 0.39
SHANK1-203ENST00000391813 GPA33Q99795 319 aa17.5■□□□□ 0.39
SHANK1-203ENST00000391813 DLEC1Q9Y238 1755 aa17.5■□□□□ 0.39
SHANK1-203ENST00000391813 SELEP16581 610 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 DCAF12L2Q5VW00 463 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 LDLRAD3Q86YD5 345 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 APH1AQ96BI3 265 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 MUCL1Q96DR8 90 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 MANBALQ9NQG1 85 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 LIMK1P53667 647 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 EDDM3BP56851 147 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 FFAR4Q5NUL3 377 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 TMEM215Q68D42 235 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 Q6ZN92 141 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 BATF2Q8N1L9 274 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 CNEP1R1Q8N9A8 125 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 M1APQ8TC57 530 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 CHRNA7P36544 502 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 CSRP3P50461 194 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 PRICKLE4Q2TBC4 344 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 KHDC3LQ587J8 217 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 CDS2O95674 445 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 HRASP01112 189 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 KRASP01116 189 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 HAAOP46952 286 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 FAM78BQ5VT40 261 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 LIAT1Q6ZQX7 453 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 THOC3Q96J01 351 aaKnown RBP17.49■□□□□ 0.39
SHANK1-203ENST00000391813 KIAA1456Q9P272 454 aa17.49■□□□□ 0.39
SHANK1-203ENST00000391813 YIF1AO95070 293 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 MT-CO3P00414 261 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 F12P00748 615 aaPredicted RBP17.48■□□□□ 0.39
SHANK1-203ENST00000391813 BPIFB3P59826 476 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 ANXA10Q9UJ72 324 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 KLF13Q9Y2Y9 288 aaPredicted RBP17.48■□□□□ 0.39
SHANK1-203ENST00000391813 SIRT4Q9Y6E7 314 aaPredicted RBP17.48■□□□□ 0.39
SHANK1-203ENST00000391813 PDCD6O75340 191 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 COL9A1P20849 921 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 FOXO1Q12778 655 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 CA5BP1Q8WTZ4 195 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 ZNRF4Q8WWF5 429 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 RAB24Q969Q5 203 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 TRIB1Q96RU8 372 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 ANGPTL4Q9BY76 406 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 SERGEFQ9UGK8 458 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 SCN1AP35498 2009 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 TRAV8-7A0A075B6U6 113 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 AQP7P3A6NL99 342 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 KIAA1324LA8MWY0 1029 aaPredicted RBP17.48■□□□□ 0.39
SHANK1-203ENST00000391813 G3V3Y1 287 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 AQP7O14520 342 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 ERVS71-1P61550 626 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 ZIC1Q15915 447 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 C21orf62-AS1Q17RA5 79 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 K7EQS6 105 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 OR2A4O95047 310 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 EDDM3AQ14507 147 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 MRGPRGQ86SM5 289 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 OR2A7Q96R45 310 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 ATP5SQ99766 215 aa17.48■□□□□ 0.39
SHANK1-203ENST00000391813 SF3B6Q9Y3B4 125 aaKnown RBP17.48■□□□□ 0.39
SHANK1-203ENST00000391813 MED19A0JLT2 244 aaPredicted RBP17.47■□□□□ 0.39
SHANK1-203ENST00000391813 SPRY1O43609 319 aaPredicted RBP17.47■□□□□ 0.39
SHANK1-203ENST00000391813 GRPP07492 148 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 RAC1P63000 192 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 NUFIP2Q7Z417 695 aaKnown RBP17.47■□□□□ 0.39
SHANK1-203ENST00000391813 TLNRD1Q9H1K6 362 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms