RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 CCDC90BQ9GZT6 254 aa17.39■□□□□ 0.37
MAP1LC3A-202ENST00000374837 Q9H521 79 aa17.39■□□□□ 0.37
MAP1LC3A-202ENST00000374837 ENSAO43768 121 aaKnown RBP17.38■□□□□ 0.37
MAP1LC3A-202ENST00000374837 ECDO95905 644 aaPredicted RBP17.38■□□□□ 0.37
MAP1LC3A-202ENST00000374837 NPBWR2P48146 333 aa17.38■□□□□ 0.37
MAP1LC3A-202ENST00000374837 MED22Q15528 200 aa17.38■□□□□ 0.37
MAP1LC3A-202ENST00000374837 C11orf91Q3C1V1 193 aa17.38■□□□□ 0.37
MAP1LC3A-202ENST00000374837 C1QL2Q7Z5L3 287 aa17.38■□□□□ 0.37
MAP1LC3A-202ENST00000374837 TEX29Q8N6K0 151 aa17.38■□□□□ 0.37
MAP1LC3A-202ENST00000374837 MRI1Q9BV20 369 aa17.38■□□□□ 0.37
MAP1LC3A-202ENST00000374837 METRNQ9UJH8 293 aa17.38■□□□□ 0.37
MAP1LC3A-202ENST00000374837 STAB1Q9NY15 2570 aa17.38■□□□□ 0.37
MAP1LC3A-202ENST00000374837 ATRQ13535 2644 aa17.38■□□□□ 0.37
MAP1LC3A-202ENST00000374837 RRP9O43818 475 aaKnown RBP17.37■□□□□ 0.37
MAP1LC3A-202ENST00000374837 ANGPTL7O43827 346 aa17.37■□□□□ 0.37
MAP1LC3A-202ENST00000374837 CYB5AP00167 134 aa17.37■□□□□ 0.37
MAP1LC3A-202ENST00000374837 KNG1P01042 644 aa17.37■□□□□ 0.37
MAP1LC3A-202ENST00000374837 BCL3P20749 454 aa17.37■□□□□ 0.37
MAP1LC3A-202ENST00000374837 CEBPDP49716 269 aaPredicted RBP17.37■□□□□ 0.37
MAP1LC3A-202ENST00000374837 KISS1Q15726 138 aa17.37■□□□□ 0.37
MAP1LC3A-202ENST00000374837 ZNRF1Q8ND25 227 aa17.37■□□□□ 0.37
MAP1LC3A-202ENST00000374837 OR5D18Q8NGL1 313 aa17.37■□□□□ 0.37
MAP1LC3A-202ENST00000374837 SLC25A10Q9UBX3 287 aaPredicted RBP17.37■□□□□ 0.37
MAP1LC3A-202ENST00000374837 OR14J1Q9UGF5 321 aa17.37■□□□□ 0.37
MAP1LC3A-202ENST00000374837 BLOC1S6Q9UL45 172 aa17.37■□□□□ 0.37
MAP1LC3A-202ENST00000374837 TRBV5-7A0A0A0MS05 114 aa17.36■□□□□ 0.37
MAP1LC3A-202ENST00000374837 IGKV1-12A0A0C4DH73 117 aa17.36■□□□□ 0.37
MAP1LC3A-202ENST00000374837 GPR37O15354 613 aa17.36■□□□□ 0.37
MAP1LC3A-202ENST00000374837 IGKV1D-12P01611 117 aa17.36■□□□□ 0.37
MAP1LC3A-202ENST00000374837 EEF1B2P24534 225 aaKnown RBP17.36■□□□□ 0.37
MAP1LC3A-202ENST00000374837 MAP2K4P45985 399 aa17.36■□□□□ 0.37
MAP1LC3A-202ENST00000374837 ZP1P60852 638 aa17.36■□□□□ 0.37
MAP1LC3A-202ENST00000374837 OR52N4Q8NGI2 321 aa17.36■□□□□ 0.37
MAP1LC3A-202ENST00000374837 NANPQ8TBE9 248 aa17.36■□□□□ 0.37
MAP1LC3A-202ENST00000374837 OR14A2Q96R54 314 aa17.36■□□□□ 0.37
MAP1LC3A-202ENST00000374837 RBFOX1Q9NWB1 397 aaKnown RBP17.36■□□□□ 0.37
MAP1LC3A-202ENST00000374837 RPUSD1Q9UJJ7 312 aaKnown RBP17.36■□□□□ 0.37
MAP1LC3A-202ENST00000374837 A0A1W2PPK0 400 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 ZNF879B4DU55 563 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 MAGEB3O15480 346 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 GPX5O75715 221 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 FSHBP01225 129 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 IFNA2P01563 188 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 ALDOBP05062 364 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 LIPFP07098 398 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 NDUFB7P17568 137 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 IGFBP3P17936 291 aaPredicted RBP17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 CAV3P56539 151 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 PPP3R1P63098 170 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 SATL1Q86VE3 508 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 Q8IYB0 196 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 FAM58AQ8N1B3 248 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 PNLDC1Q8NA58 520 aaKnown RBP17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 LY6G5BQ8NDX9 201 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 TMEM185AQ8NFB2 350 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 EMG1Q92979 244 aaKnown RBP17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 DCTN5Q9BTE1 182 aa17.35■□□□□ 0.37
MAP1LC3A-202ENST00000374837 PIN1P1O15428 100 aa17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 KDM4BO94953 1096 aa17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 TMEM225BP0DP42 221 aa17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 CALCBP10092 127 aa17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 TGFBR2P37173 567 aa17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 FGF12P61328 243 aa17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 GPR50Q13585 617 aa17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 KLF17Q5JT82 389 aaPredicted RBP17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 SAXO1Q8IYX7 474 aa17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 ZNF561Q8N587 486 aa17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 ZSCAN4Q8NAM6 433 aaPredicted RBP17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 H1FXQ92522 213 aaKnown RBP17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 DERL3Q96Q80 235 aa17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 CNTD2Q9H8S5 307 aa17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 ELL3Q9HB65 397 aaPredicted RBP17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 TMEM138Q9NPI0 162 aa17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 IL36RNQ9UBH0 155 aa17.34■□□□□ 0.37
MAP1LC3A-202ENST00000374837 TRAV8-7A0A075B6U6 113 aa17.33■□□□□ 0.36
MAP1LC3A-202ENST00000374837 HSMCR30P0CW71 290 aa17.33■□□□□ 0.36
MAP1LC3A-202ENST00000374837 PPIAL4GP0DN37 164 aa17.33■□□□□ 0.36
MAP1LC3A-202ENST00000374837 BDKRB2P30411 391 aa17.33■□□□□ 0.36
MAP1LC3A-202ENST00000374837 CAPZA1P52907 286 aa17.33■□□□□ 0.36
MAP1LC3A-202ENST00000374837 UNQ9370/PRO34162Q6UXP9 181 aa17.33■□□□□ 0.36
MAP1LC3A-202ENST00000374837 MS4A15Q8N5U1 240 aa17.33■□□□□ 0.36
MAP1LC3A-202ENST00000374837 UPRTQ96BW1 309 aa17.33■□□□□ 0.36
MAP1LC3A-202ENST00000374837 GPER1Q99527 375 aa17.33■□□□□ 0.36
MAP1LC3A-202ENST00000374837 NKX3-1Q99801 234 aaPredicted RBP17.33■□□□□ 0.36
MAP1LC3A-202ENST00000374837 HMG20AQ9NP66 347 aa17.33■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ISYNA1Q9NPH2 558 aa17.33■□□□□ 0.36
MAP1LC3A-202ENST00000374837 SVEP1Q4LDE5 3571 aa17.33■□□□□ 0.36
MAP1LC3A-202ENST00000374837 GABRPO00591 440 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 SFTPBP07988 381 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 CHRM2P08172 466 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 PRKACAP17612 351 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 DUSP1P28562 367 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 GABARAPL2P60520 117 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ARF6P62330 175 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 COL10A1Q03692 680 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 TPBGQ13641 420 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 INSL4Q14641 139 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ACSM3Q53FZ2 586 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ARMCX4Q5H9R4 360 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 LIPKQ5VXJ0 399 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms