RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 CARHSP1Q9Y2V2 147 aaKnown RBP21.73■■□□□ 1.07
ROM1-201ENST00000278833 CDK2AP1O14519 115 aa21.72■■□□□ 1.07
ROM1-201ENST00000278833 RFPL3SP0C7P2 107 aa21.72■■□□□ 1.07
ROM1-201ENST00000278833 UCP3P55916 312 aa21.72■■□□□ 1.07
ROM1-201ENST00000278833 CLDN15P56746 228 aa21.72■■□□□ 1.07
ROM1-201ENST00000278833 CEACAM16Q2WEN9 425 aa21.72■■□□□ 1.07
ROM1-201ENST00000278833 PDSS1Q5T2R2 415 aa21.72■■□□□ 1.07
ROM1-201ENST00000278833 C6orf15Q6UXA7 325 aaPredicted RBP21.72■■□□□ 1.07
ROM1-201ENST00000278833 ESX1Q8N693 406 aa21.72■■□□□ 1.07
ROM1-201ENST00000278833 Q8NFD4 153 aa21.72■■□□□ 1.07
ROM1-201ENST00000278833 CT55Q8WUE5 264 aa21.72■■□□□ 1.07
ROM1-201ENST00000278833 HDHD3Q9BSH5 251 aaPredicted RBP21.72■■□□□ 1.07
ROM1-201ENST00000278833 C1QTNF5Q9BXJ0 243 aa21.72■■□□□ 1.07
ROM1-201ENST00000278833 NKX6-2Q9C056 277 aaPredicted RBP21.72■■□□□ 1.07
ROM1-201ENST00000278833 C12orf4Q9NQ89 552 aa21.72■■□□□ 1.07
ROM1-201ENST00000278833 PCSK5Q92824 1860 aa21.72■■□□□ 1.07
ROM1-201ENST00000278833 SPTBN2O15020 2390 aa21.72■■□□□ 1.07
ROM1-201ENST00000278833 ZNF816-ZNF321PA0A0X1KG74 233 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 FAM230AA0A1W2PPH8 454 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 ABCD4O14678 606 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 KCNAB3O43448 404 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 HKR1P10072 659 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 CTRB1P17538 263 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 CTRB2Q6GPI1 263 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 OSR2Q8N2R0 312 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 AKR7LQ8NHP1 331 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 SLC7A11Q9UPY5 501 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 ANGPTL7O43827 346 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 DEDDO75618 318 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 KNG1P01042 644 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 IFNA21P01568 189 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 HOXB5P09067 269 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 CEACAM1P13688 526 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 OTX2P32243 289 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 TAF9Q16594 264 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 MST1LQ2TV78 715 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 FAM122CQ6P4D5 195 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 COLCA1Q6ZS62 124 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 TMED6Q8WW62 240 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 SULT4A1Q9BR01 284 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 FAAP24Q9BTP7 215 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 DEPPQ9NTK1 212 aa21.71■■□□□ 1.07
ROM1-201ENST00000278833 IGKV1-12A0A0C4DH73 117 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 FAM90A10PA6NDY2 464 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 FAM90A18PA6NE21 464 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 FAM90A16PA6NEW6 464 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 FAM90A20PA6NIJ5 464 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 FAM90A8PA6NJQ4 464 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 FAM90A7PA6NKC0 464 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 FAM90A22PA8MWA6 464 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 FAM90A12PA8MX19 464 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 FAM90A5PA8MXJ8 464 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 FAM90A23PA8MXZ1 464 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 SPRY1O43609 319 aaPredicted RBP21.7■■□□□ 1.06
ROM1-201ENST00000278833 IGKV1D-12P01611 117 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 FAM90A15PP0C7V4 464 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 FAM90A13PP0C7W8 464 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 FAM90A14PP0C7W9 464 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 FAM90A24PP0C7X0 464 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 CYB561P49447 251 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 NOVA1P51513 510 aaKnown RBP21.7■■□□□ 1.06
ROM1-201ENST00000278833 FOXO1Q12778 655 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 PDZK1IP1Q13113 114 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 IAH1Q2TAA2 248 aaPredicted RBP21.7■■□□□ 1.06
ROM1-201ENST00000278833 TMEM268Q5VZI3 342 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 ZNF775Q96BV0 537 aaPredicted RBP21.7■■□□□ 1.06
ROM1-201ENST00000278833 DDA1Q9BW61 102 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 SUCNR1Q9BXA5 334 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 NAA60Q9H7X0 242 aa21.7■■□□□ 1.06
ROM1-201ENST00000278833 BOKQ9UMX3 212 aaPredicted RBP21.7■■□□□ 1.06
ROM1-201ENST00000278833 SPAARA0A1B0GVQ0 90 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 MASP2O00187 686 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 TOR1AO14656 332 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 WIPI1Q5MNZ9 446 aaPredicted RBP21.69■■□□□ 1.06
ROM1-201ENST00000278833 SVBPQ8N300 66 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 OR10AD1Q8NGE0 317 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 LOXL2Q9Y4K0 774 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 PDCD6O75340 191 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 FARS2O95363 451 aaKnown RBP21.69■■□□□ 1.06
ROM1-201ENST00000278833 ACTL6AO96019 429 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 PJVKQ0ZLH3 352 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 SKA3Q8IX90 412 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 PSMF1Q92530 271 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 SPRY4Q9C004 299 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 LIME1Q9H400 295 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 PLEKHA2Q9HB19 425 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 ZFP57Q9NU63 452 aa21.69■■□□□ 1.06
ROM1-201ENST00000278833 TPD52L2O43399 206 aaKnown RBP21.68■■□□□ 1.06
ROM1-201ENST00000278833 CST4P01036 141 aa21.68■■□□□ 1.06
ROM1-201ENST00000278833 H2AFB1P0C5Y9 115 aa21.68■■□□□ 1.06
ROM1-201ENST00000278833 ZNF728P0DKX0 622 aa21.68■■□□□ 1.06
ROM1-201ENST00000278833 RPS18P62269 152 aaKnown RBP21.68■■□□□ 1.06
ROM1-201ENST00000278833 DEFA5Q01523 94 aa21.68■■□□□ 1.06
ROM1-201ENST00000278833 ZNF92Q03936 586 aa21.68■■□□□ 1.06
ROM1-201ENST00000278833 TMEM187Q14656 261 aa21.68■■□□□ 1.06
ROM1-201ENST00000278833 SMCO1Q147U7 214 aa21.68■■□□□ 1.06
ROM1-201ENST00000278833 SRSF7Q16629 238 aaKnown RBP eCLIP21.68■■□□□ 1.06
ROM1-201ENST00000278833 PABPC1L2AQ5JQF8 200 aa21.68■■□□□ 1.06
ROM1-201ENST00000278833 GGNBP1Q5YKI7 109 aa21.68■■□□□ 1.06
ROM1-201ENST00000278833 TMEM211Q6ICI0 200 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms