RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 ISG20L2Q9H9L3 353 aaKnown RBP10.2□□□□□ -0.78
PTPN4-201ENST00000263708 FAM53CQ9NYF3 392 aa10.2□□□□□ -0.78
PTPN4-201ENST00000263708 TRIP12Q14669 1992 aaPredicted RBP10.2□□□□□ -0.78
PTPN4-201ENST00000263708 CDRT15L2A8MXV6 281 aa10.2□□□□□ -0.78
PTPN4-201ENST00000263708 IGHA1P01876 353 aa10.2□□□□□ -0.78
PTPN4-201ENST00000263708 IGHA2P01877 340 aa10.2□□□□□ -0.78
PTPN4-201ENST00000263708 NPPBP16860 134 aa10.2□□□□□ -0.78
PTPN4-201ENST00000263708 COL19A1Q14993 1142 aa10.2□□□□□ -0.78
PTPN4-201ENST00000263708 C17orf99Q6UX52 265 aa10.2□□□□□ -0.78
PTPN4-201ENST00000263708 ZC3H3Q8IXZ2 948 aaKnown RBP10.2□□□□□ -0.78
PTPN4-201ENST00000263708 DUSP18Q8NEJ0 188 aa10.2□□□□□ -0.78
PTPN4-201ENST00000263708 OR1L6Q8NGR2 347 aa10.2□□□□□ -0.78
PTPN4-201ENST00000263708 SLC39A13Q96H72 371 aa10.2□□□□□ -0.78
PTPN4-201ENST00000263708 AUNIPQ9H7T9 357 aa10.2□□□□□ -0.78
PTPN4-201ENST00000263708 ZMIZ1Q9ULJ6 1067 aa10.2□□□□□ -0.78
PTPN4-201ENST00000263708 DAPP1Q9UN19 280 aa10.2□□□□□ -0.78
PTPN4-201ENST00000263708 SPANXN1Q5VSR9 72 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 WDR89Q96FK6 387 aaPredicted RBP10.19□□□□□ -0.78
PTPN4-201ENST00000263708 ERRFI1Q9UJM3 462 aaPredicted RBP10.19□□□□□ -0.78
PTPN4-201ENST00000263708 RGS13O14921 159 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 BTF3P20290 206 aaKnown RBP10.19□□□□□ -0.78
PTPN4-201ENST00000263708 EMP1P54849 157 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 NUFIP2Q7Z417 695 aaKnown RBP10.19□□□□□ -0.78
PTPN4-201ENST00000263708 OR2D3Q8NGH3 330 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 OR5C1Q8NGR4 320 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 OR13G1Q8NGZ3 307 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 LRRC29Q8WV35 223 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 NEURL4Q96JN8 1562 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 TARM1B6A8C7 271 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 MRGPRDQ8TDS7 321 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 A0A1W2PR48 441 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 FGF17O60258 216 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 CCL2P13500 99 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 TFPI2P48307 235 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 NMUP48645 174 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 HDGFL3Q9Y3E1 203 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 HAX1O00165 279 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 CD3EP07766 207 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 DCTDP32321 178 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 AQP6Q13520 282 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 BAP18Q8IXM2 172 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 ZDHHC5Q9C0B5 715 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 IGSF23A1L1A6 192 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 PPP1R17O96001 155 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 CD1EP15812 388 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 COL8A1P27658 744 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 ID4P47928 161 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 FOXF1Q12946 379 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 DUSP8Q13202 625 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 REC114Q7Z4M0 266 aa10.19□□□□□ -0.78
PTPN4-201ENST00000263708 KIAA1217Q5T5P2 1943 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 C7orf72A4D263 438 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 ZNF205O95201 554 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 PLAUP00749 431 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 PNLIPRP3Q17RR3 467 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 TMEM52BQ4KMG9 183 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 GSX2Q9BZM3 304 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 CORTO00230 105 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 ARG1P05089 322 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 CTSLP07711 333 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 WNT3P56703 355 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 SPEM2Q0P670 501 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 HIST3H3Q16695 136 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 C1orf220Q5T0J3 134 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 ITGB4P16144 1822 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 LOC107984156A0A0G2JMH3 177 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 TMEM218A2RU14 115 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 GUCA2AQ02747 115 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 PYCR3Q53H96 274 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 ARL17AQ8IVW1 177 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 BAHD1Q8TBE0 780 aaPredicted RBP10.18□□□□□ -0.78
PTPN4-201ENST00000263708 PTPMT1Q8WUK0 201 aaPredicted RBP10.18□□□□□ -0.78
PTPN4-201ENST00000263708 CACNG5Q9UF02 275 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 M0R296 226 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 MDH2P40926 338 aaKnown RBP10.18□□□□□ -0.78
PTPN4-201ENST00000263708 WIPI1Q5MNZ9 446 aaPredicted RBP10.18□□□□□ -0.78
PTPN4-201ENST00000263708 OR8I2Q8N0Y5 310 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 SNRNP40Q96DI7 357 aaKnown RBP10.18□□□□□ -0.78
PTPN4-201ENST00000263708 PIK3IP1Q96FE7 263 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 PHF7Q9BWX1 381 aaPredicted RBP10.18□□□□□ -0.78
PTPN4-201ENST00000263708 FBXL17Q9UF56 701 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 C19orf53Q9UNZ5 99 aaPredicted RBP10.18□□□□□ -0.78
PTPN4-201ENST00000263708 IFITM5A6NNB3 132 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 AP4M1O00189 453 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 SDHBP21912 280 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 CSF2RBP32927 897 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 PET117Q6UWS5 81 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 CARFQ8N187 725 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 CMC2Q9NRP2 79 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 FRG2CA6NGY1 282 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 ALG1L2C9J202 215 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 SS18L1O75177 396 aaPredicted RBP10.18□□□□□ -0.78
PTPN4-201ENST00000263708 MT-CO3P00414 261 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 THBS4P35443 961 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 CD96P40200 585 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 FAM71E1Q6IPT2 247 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 C15orf39Q6ZRI6 1047 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 BPIFA4PQ86YQ2 179 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 GABARAPL3Q9BY60 117 aa10.18□□□□□ -0.78
PTPN4-201ENST00000263708 MAP1LC3B2A6NCE7 125 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms