RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ASCL3Q9NQ33 180 aa11.77□□□□□ -0.52
NEK3-205ENST00000610828 AK3Q9UIJ7 227 aa11.77□□□□□ -0.52
NEK3-205ENST00000610828 ST3GAL6Q9Y274 331 aa11.77□□□□□ -0.52
NEK3-205ENST00000610828 ZNF318Q5VUA4 2279 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 LINC00862A6NCI5 91 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 EEF1E1-BLOC1S5C9J1V9 151 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 COX5BP10606 129 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 AGTR1P30556 359 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 PLP2Q04941 152 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 SRSF4Q08170 494 aaKnown RBP11.77□□□□□ -0.53
NEK3-205ENST00000610828 IKZF1Q13422 519 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 BRICD5Q6PL45 260 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 MRPL21Q7Z2W9 205 aaKnown RBP11.77□□□□□ -0.53
NEK3-205ENST00000610828 PEG10Q86TG7 708 aaKnown RBP11.77□□□□□ -0.53
NEK3-205ENST00000610828 BATF2Q8N1L9 274 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 ZNF611Q8N823 705 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 TMEM185AQ8NFB2 350 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 PXT1Q8NFP0 134 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 OR10AD1Q8NGE0 317 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 CMSS1Q9BQ75 279 aaKnown RBP11.77□□□□□ -0.53
NEK3-205ENST00000610828 RTBDNQ9BSG5 229 aaPredicted RBP11.77□□□□□ -0.53
NEK3-205ENST00000610828 REPIN1Q9BWE0 567 aaKnown RBP11.77□□□□□ -0.53
NEK3-205ENST00000610828 GSX2Q9BZM3 304 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 ZDHHC11Q9H8X9 412 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 HSF4Q9ULV5 492 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 OSGIN2Q9Y236 505 aa11.77□□□□□ -0.53
NEK3-205ENST00000610828 ARHGAP21Q5T5U3 1957 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 C13orf42A0A1B0GVH6 325 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 C5orf51A6NDU8 294 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 CHATP28329 748 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 SLC9A3R2Q15599 337 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 HIKESHIQ53FT3 197 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 GSG1LQ6UXU4 331 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 FDCSPQ8NFU4 85 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 DYRK2Q92630 601 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 APOBEC3DQ96AK3 386 aaPredicted RBP11.76□□□□□ -0.53
NEK3-205ENST00000610828 MICU1Q9BPX6 476 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 SULT4A1Q9BR01 284 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 DBX1A6NMT0 343 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 NGFP01138 241 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 GLRA1P23415 457 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 OPRM1P35372 400 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 ATXN7L3Q14CW9 347 aaPredicted RBP11.76□□□□□ -0.53
NEK3-205ENST00000610828 PDCD1Q15116 288 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 ESCO2Q56NI9 601 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 NHLRC3Q5JS37 347 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 C11orf87Q6NUJ2 197 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 ALKAL2Q6UX46 152 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 CLEC18BQ6UXF7 455 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 SLC25A26Q70HW3 274 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 MRPS24Q96EL2 167 aaKnown RBP11.76□□□□□ -0.53
NEK3-205ENST00000610828 PRR13Q9NZ81 148 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 IL36GQ9NZH8 169 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 ANXA10Q9UJ72 324 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 STARD10Q9Y365 291 aa11.76□□□□□ -0.53
NEK3-205ENST00000610828 MSTNO14793 375 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 IL18BPO95998 194 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 P2RX3P56373 397 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 PRDX4Q13162 271 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 POM121L2Q96KW2 1035 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 ZNF2Q9BSG1 426 aaPredicted RBP11.75□□□□□ -0.53
NEK3-205ENST00000610828 PCDHB16Q9NRJ7 776 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 RDH8Q9NYR8 311 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 FAM221AA4D161 298 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 SFT2D2O95562 160 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 KNG1P01042 644 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 PGAM2P15259 253 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 MPGP29372 298 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 SERPINF1P36955 418 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 NPBWR2P48146 333 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 GPM6AP51674 278 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 SUPT4H1P63272 117 aaKnown RBP11.75□□□□□ -0.53
NEK3-205ENST00000610828 CLN3Q13286 438 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 FBXW9Q5XUX1 488 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 BHLHE23Q8NDY6 225 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 CRIM1Q9NZV1 1036 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 ZNF629Q9UEG4 869 aaPredicted RBP11.75□□□□□ -0.53
NEK3-205ENST00000610828 EDARQ9UNE0 448 aa11.75□□□□□ -0.53
NEK3-205ENST00000610828 CNOT1A5YKK6 2376 aaKnown RBP11.74□□□□□ -0.53
NEK3-205ENST00000610828 SPDEFO95238 335 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 FCGR3AP08637 254 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 WT1P19544 449 aaPredicted RBP11.74□□□□□ -0.53
NEK3-205ENST00000610828 APLNRP35414 380 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 HAAOP46952 286 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 RBM11P57052 281 aaKnown RBP11.74□□□□□ -0.53
NEK3-205ENST00000610828 TMEM65Q6PI78 240 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 P4HA3Q7Z4N8 544 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 OR1K1Q8NGR3 316 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 OR51B6Q9H340 312 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 C14orf166Q9Y224 244 aaKnown RBP11.74□□□□□ -0.53
NEK3-205ENST00000610828 OR7C1O76099 320 aaPredicted RBP11.74□□□□□ -0.53
NEK3-205ENST00000610828 SLC25A4P12235 298 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 COMMD7Q86VX2 200 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 ZDHHC23Q8IYP9 409 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 COQ8AQ8NI60 647 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 THAP6Q8TBB0 222 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 HPSE2Q8WWQ2 592 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 TNFSF18Q9UNG2 199 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 AUP1Q9Y679 476 aa11.74□□□□□ -0.53
NEK3-205ENST00000610828 LAMA5O15230 3695 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms