RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 PPP1R14BQ96C90 147 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 PLPPR2Q96GM1 343 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 RADILQ96JH8 1075 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 ABHD1Q96SE0 405 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 TMEM204Q9BSN7 226 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 CA10Q9NS85 328 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 RBFOX1Q9NWB1 397 aaKnown RBP7.27□□□□□ -1.25
VAPB-206ENST00000520497 NKIRAS2Q9NYR9 191 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 MYEF2Q9P2K5 600 aaKnown RBP7.27□□□□□ -1.25
VAPB-206ENST00000520497 FZR1Q9UM11 496 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 CACNG2Q9Y698 323 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 TMEM14DPA8MWL7 114 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 C19orf84I3L1E1 186 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 MLNRO43193 412 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 TIMM8AO60220 97 aaPredicted RBP7.26□□□□□ -1.25
VAPB-206ENST00000520497 MPIG6BO95866 241 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 LPLP06858 475 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 CD3EP07766 207 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 GSTP1P09211 210 aaKnown RBP7.26□□□□□ -1.25
VAPB-206ENST00000520497 VSIG8P0DPA2 414 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 CA6P23280 308 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 GDNFP39905 211 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 CBX5P45973 191 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 PTH2RP49190 550 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 KLF3P57682 345 aaPredicted RBP7.26□□□□□ -1.25
VAPB-206ENST00000520497 DGCR2P98153 550 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 PLA2G7Q13093 441 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 UNC119Q13432 240 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 ADIPOQQ15848 244 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 SLC22A6Q4U2R8 563 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 RNASE12Q5GAN4 147 aaKnown RBP7.26□□□□□ -1.25
VAPB-206ENST00000520497 FAM76BQ5HYJ3 339 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 RSBN1Q5VWQ0 802 aaPredicted RBP7.26□□□□□ -1.25
VAPB-206ENST00000520497 SLC22A25Q6T423 547 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 CCBE1Q6UXH8 406 aaPredicted RBP7.26□□□□□ -1.25
VAPB-206ENST00000520497 ASCL4Q6XD76 172 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 C1QL2Q7Z5L3 287 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 LRP11Q86VZ4 500 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 MKXQ8IYA7 352 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 DTX3Q8N9I9 347 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 PXT1Q8NFP0 134 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 OR8S1Q8NH09 359 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 YIPF5Q969M3 257 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 TRIM63Q969Q1 353 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 MRPL24Q96A35 216 aaKnown RBP7.26□□□□□ -1.25
VAPB-206ENST00000520497 MRPS24Q96EL2 167 aaKnown RBP7.26□□□□□ -1.25
VAPB-206ENST00000520497 POM121Q96HA1 1249 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 MICU1Q9BPX6 476 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 ADAT1Q9BUB4 502 aaKnown RBP7.26□□□□□ -1.25
VAPB-206ENST00000520497 RTL8AQ9BWD3 113 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 MRPL37Q9BZE1 423 aaKnown RBP7.26□□□□□ -1.25
VAPB-206ENST00000520497 C11orf54Q9H0W9 315 aaPredicted RBP7.26□□□□□ -1.25
VAPB-206ENST00000520497 DPAGT1Q9H3H5 408 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 KCNK15Q9H427 330 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 ZNF107Q9UII5 783 aaPredicted RBP7.26□□□□□ -1.25
VAPB-206ENST00000520497 TBC1D24Q9ULP9 559 aa7.26□□□□□ -1.25
VAPB-206ENST00000520497 PRSS44E7EML9 344 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 E7EQL1 145 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 H0YL77 283 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 TPD52L2O43399 206 aaKnown RBP7.25□□□□□ -1.25
VAPB-206ENST00000520497 ORC5O43913 435 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 CDC14BO60729 498 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 HTR3BO95264 441 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 CD3GP09693 182 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 GTF2F2P13984 249 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 MGMTP16455 207 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 SERPINA2P20848 420 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 MPZP25189 248 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 RCVRNP35243 200 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 VEGFCP49767 419 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 GPM6AP51674 278 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 EFNB2P52799 333 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 GNG2P59768 71 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 SELENOVP59797 346 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 GNG3P63215 75 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 MRPS15P82914 257 aaKnown RBP7.25□□□□□ -1.25
VAPB-206ENST00000520497 PNLIPRP3Q17RR3 467 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 VHLLQ6RSH7 139 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 GDPD3Q7L5L3 318 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 NRARPQ7Z6K4 114 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 WDR86Q86TI4 376 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 BIVMQ86UB2 503 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 CALHM1Q8IU99 346 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 SAXO1Q8IYX7 474 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 OR51T1Q8NGJ9 327 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 OR5D18Q8NGL1 313 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 OR10R2Q8NGX6 335 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 OR52I2Q8NH67 350 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 LILRB1Q8NHL6 650 aaPredicted RBP7.25□□□□□ -1.25
VAPB-206ENST00000520497 RAB3CQ96E17 227 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 RNF170Q96K19 258 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 SYT3Q9BQG1 590 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 AUNIPQ9H7T9 357 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 RHOFQ9HBH0 211 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 IFT46Q9NQC8 304 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 TMEM100Q9NV29 134 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 IL36GQ9NZH8 169 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 RNF115Q9Y4L5 304 aa7.25□□□□□ -1.25
VAPB-206ENST00000520497 KLF2Q9Y5W3 355 aaPredicted RBP7.25□□□□□ -1.25
VAPB-206ENST00000520497 ATP23Q9Y6H3 246 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms