RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 RDH12Q96NR8 316 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 KCNS3Q9BQ31 491 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 SLC25A39Q9BZJ4 359 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 TOLLIPQ9H0E2 274 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 PRO3102Q9H379 93 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 HMG20AQ9NP66 347 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 DDX19AQ9NUU7 478 aaKnown RBP3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 KLF12Q9Y4X4 402 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 MYH6P13533 1939 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 GBF1Q92538 1859 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 A0A0A6YYD5 115 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 A0A1W2PP18 115 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 LINC01619G3V211 115 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 REM1O75628 298 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 ZMPSTE24O75844 475 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 SC5DO75845 299 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 SLC22A5O76082 557 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 TTC4O95801 387 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 SLC35A1P78382 337 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 C2orf54Q08AI8 447 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 UBE2SQ16763 222 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 FBXW9Q5XUX1 488 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 RTL4Q6ZR62 310 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 C19orf18Q8NEA5 215 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 LGALS14Q8TCE9 139 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 SAMD10Q9BYL1 202 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 ULBP2Q9BZM5 246 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 OR51B5Q9H339 312 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 ZNF442Q9H7R0 627 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 C12orf10Q9HB07 376 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 CHMP5Q9NZZ3 219 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 CFL2Q9Y281 166 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 ZNF236Q9UL36 1845 aa3.44□□□□□ -1.86
HMGB1P3-201ENST00000502802 MYH7BA7E2Y1 1941 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 LCTP09848 1927 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 IGHV2OR16-5A0A0B4J2B6 119 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 A0A0U1RQV1 116 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 A0A1B0GVY2 172 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 TVP23AA6NH52 213 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 GATCO43716 136 aaKnown RBP3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 SPAG7O75391 227 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 GCM2O75603 506 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 CNMDO75829 334 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 YIF1AO95070 293 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 SMC2O95347 1197 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 ZNF823P16415 610 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 PGAM1P18669 254 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 PPOXP50336 477 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 GFERP55789 205 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 ESRRGP62508 458 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 CRADDP78560 199 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 CYP24A1Q07973 514 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 MAD2L1BPQ15013 274 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 SNRNP35Q16560 246 aaKnown RBP3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 DEFB116Q30KQ4 102 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 FAM78AQ5JUQ0 283 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 DEGS2Q6QHC5 323 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 CALHM1Q8IU99 346 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 ITPRIPQ8IWB1 547 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 SYCE1Q8N0S2 351 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 PGAM4Q8N0Y7 254 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 Q8N7P7 452 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 DRAXINQ8NBI3 349 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 OR4D6Q8NGJ1 314 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 OR6K2Q8NGY2 324 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 RXFP2Q8WXD0 754 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 RERGQ96A58 199 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 PDXPQ96GD0 296 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 FAM19A4Q96LR4 140 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 SULT4A1Q9BR01 284 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 TMEM243Q9BU79 118 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 PLA2G2FQ9BZM2 168 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 PORCNQ9H237 461 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 ARV1Q9H2C2 271 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 TREM1Q9NP99 234 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 ZNF223Q9UK11 482 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 SIGLEC9Q9Y336 463 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 HES2Q9Y543 173 aa3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 TSSC4Q9Y5U2 329 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P3-201ENST00000502802 MUC3AQ02505 3323 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 NCOR1O75376 2440 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 TRIOO75962 3097 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 TRAV8-7A0A075B6U6 113 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 IGHV1OR15-9A0A0B4J2B8 117 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 K7EN84 100 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 TNFRSF11BO00300 401 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 TAAR5O14804 337 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 SLC35G6P0C7Q6 338 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 LOXP28300 417 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 POLR2IP36954 125 aaKnown RBP3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 KCNJ3P48549 501 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 MLF1P58340 268 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 SIGLEC14Q08ET2 396 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 DYNC1I2Q13409 638 aaKnown RBP3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 USF2Q15853 346 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 TNXAQ16473 311 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 PSG3Q16557 428 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 FAM27D1Q5T7N8 215 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 STEAP4Q687X5 459 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 Q6ZVH6 145 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms