RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	IGKV1-27	A0A075B6S5	117 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	SMIM31	A0A1B0GVY4	71 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	MEGF11	A6BM72	1044 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991		A6NLC8	198 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	TMEM210	A6NLX4	147 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	PLAT	P00750	562 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	ALDOB	P05062	364 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	CD55	P08174	381 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	CLEC2L	P0C7M8	214 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	RAB3B	P20337	219 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	HAAO	P46952	286 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	MTNR1B	P49286	362 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	POU3F4	P49335	361 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	KISS1	Q15726	138 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	RNF144B	Q7Z419	303 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	WDR86	Q86TI4	376 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	ZNF573	Q86YE8	665 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	NKAIN3	Q8N8D7	197 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	BCL7B	Q9BQE9	202 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	RBM38	Q9H0Z9	239 aa	Known RBP	10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	SAP30L	Q9HAJ7	183 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	UFSP2	Q9NUQ7	469 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	NDUFA13	Q9P0J0	144 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991	DOCK11	Q5JSL3	2073 aa		10.99	□□□□□ -0.65
NR1H3-223	ENST00000486991		B4DSR2	109 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	WNT9B	O14905	357 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	PPIH	O43447	177 aa	Known RBP	10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	TNFRSF1A	P19438	455 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	ZNF93	P35789	620 aa	Predicted RBP	10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	OR10A3	P58181	314 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	ZNF154	Q13106	437 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	MPPED2	Q15777	294 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	GLT8D1	Q68CQ7	371 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	HAGHL	Q6PII5	290 aa	Predicted RBP	10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	MOGAT3	Q86VF5	341 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	TPRA1	Q86W33	373 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	ANGPTL5	Q86XS5	388 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	CELF2-AS1	Q8N7Q2	184 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	OR5D18	Q8NGL1	313 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	NDNF	Q8TB73	568 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	C12orf43	Q96C57	262 aa	Known RBP	10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	CPNE2	Q96FN4	548 aa	Predicted RBP	10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	TIMD4	Q96H15	378 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	GFI1	Q99684	422 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	OR51I2	Q9H344	312 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	C1orf123	Q9NWV4	160 aa		10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	RSL24D1	Q9UHA3	163 aa	Known RBP	10.98	□□□□□ -0.65
NR1H3-223	ENST00000486991	hCG_1807616	A0A1W2PRN6	198 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991		H3BMQ9	156 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	SLC22A1	O15245	554 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	CDC14B	O60729	498 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	SRP14	P37108	136 aa	Known RBP	10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	RPS19	P39019	145 aa	Known RBP	10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	OR3A4P	P47883	348 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	PSMD7	P51665	324 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	DVL1P1	P54792	670 aa	Predicted RBP	10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	CAV3	P56539	151 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	HNRNPA0	Q13151	305 aa	Known RBP	10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	SPCS2	Q15005	226 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	HFE	Q30201	348 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	ZNF826P	Q6ZT77	177 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	USP43	Q70EL4	1123 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	CALHM1	Q8IU99	346 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	TEX29	Q8N6K0	151 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	PNLDC1	Q8NA58	520 aa	Known RBP	10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	SCCPDH	Q8NBX0	429 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	TNFAIP8L1	Q8WVP5	186 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	RAB1C	Q92928	201 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	FOXRED1	Q96CU9	486 aa	Predicted RBP	10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	FAM192A	Q9GZU8	254 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	DCSTAMP	Q9H295	470 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	METTL17	Q9H7H0	456 aa	Predicted RBP	10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	FN3KRP	Q9HA64	309 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	PLGRKT	Q9HBL7	147 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	BATF3	Q9NR55	127 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	TREM2	Q9NZC2	230 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	PPP1R3C	Q9UQK1	317 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991		V9GY05	133 aa		10.97	□□□□□ -0.65
NR1H3-223	ENST00000486991	IGHV1-69-2	A0A0G2JMI3	117 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991		J3QT63	122 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	CDIPT	O14735	213 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	SPRY1	O43609	319 aa	Predicted RBP	10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	TCF21	O43680	179 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	VENTX	O95231	258 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	PTBP3	O95758	552 aa	Known RBP	10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	CYB5A	P00167	134 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	IL1A	P01583	271 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	TMEM225B	P0DP42	221 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	GATA4	P43694	442 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	FAM76B	Q5HYJ3	339 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	HES5	Q5TA89	166 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	CRIP3	Q6Q6R5	217 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	SLC25A26	Q70HW3	274 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	PEG10	Q86TG7	708 aa	Known RBP	10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	GLCCI1	Q86VQ1	547 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	CDH26	Q8IXH8	852 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	OR11L1	Q8NGX0	322 aa		10.96	□□□□□ -0.65
NR1H3-223	ENST00000486991	AQP3	Q92482	292 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms