RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 OR11G2Q8NGC1 345 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 OIT3Q8WWZ8 545 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 SNX22Q96L94 193 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 FBXO34Q9NWN3 711 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 IGHV1OR15-9A0A0B4J2B8 117 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 PQLC2LA1A4F0 135 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 HOXD4P09016 255 aaPredicted RBP17.55■□□□□ 0.4
SHANK1-203ENST00000391813 CYB561P49447 251 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 ERVFC1-1P60608 527 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 PATE1Q8WXA2 126 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 TTC3P53804 2025 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 FAM24AA6NFZ4 105 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 OR4C45A6NMZ5 311 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 PTP4A3O75365 173 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 FGF2P09038 288 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 ST6GAL1P15907 406 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 COX19Q49B96 90 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 OR2B11Q5JQS5 317 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 LSRQ86X29 649 aaPredicted RBP17.55■□□□□ 0.4
SHANK1-203ENST00000391813 ALG14Q96F25 216 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 NEU3Q9UQ49 428 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 DHHO43323 396 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 DRAM2Q6UX65 266 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 GVQW1Q8N7I0 195 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 CNTD2Q9H8S5 307 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 HDGFL3Q9Y3E1 203 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 LIPGQ9Y5X9 500 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 HPP00738 406 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 RPLP1P05386 114 aaKnown RBP17.55■□□□□ 0.4
SHANK1-203ENST00000391813 PMCHP20382 165 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 DLK1P80370 383 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 ABLIM2Q6H8Q1 611 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 CDC20BQ86Y33 519 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 ANAPC16Q96DE5 110 aa17.55■□□□□ 0.4
SHANK1-203ENST00000391813 A0A1B0GTH9 108 aa17.54■□□□□ 0.4
SHANK1-203ENST00000391813 ABCD4O14678 606 aa17.54■□□□□ 0.4
SHANK1-203ENST00000391813 OR7C2O60412 319 aa17.54■□□□□ 0.4
SHANK1-203ENST00000391813 UBE2L5PA0A1B0GUS4 154 aa17.54■□□□□ 0.4
SHANK1-203ENST00000391813 SH2D1BO14796 132 aa17.54■□□□□ 0.4
SHANK1-203ENST00000391813 ZNF737O75373 536 aa17.54■□□□□ 0.4
SHANK1-203ENST00000391813 ONECUT2O95948 504 aa17.54■□□□□ 0.4
SHANK1-203ENST00000391813 ETFRF1Q6IPR1 90 aa17.54■□□□□ 0.4
SHANK1-203ENST00000391813 ZNF770Q6IQ21 691 aaPredicted RBP17.54■□□□□ 0.4
SHANK1-203ENST00000391813 TMEM104Q8NE00 496 aa17.54■□□□□ 0.4
SHANK1-203ENST00000391813 OR11H4Q8NGC9 324 aa17.54■□□□□ 0.4
SHANK1-203ENST00000391813 LRRC61Q9BV99 259 aa17.54■□□□□ 0.4
SHANK1-203ENST00000391813 FKBP11Q9NYL4 201 aa17.54■□□□□ 0.4
SHANK1-203ENST00000391813 A0A1W2PNV4 684 aa17.54■□□□□ 0.4
SHANK1-203ENST00000391813 NAT8BQ9UHF3 227 aa17.54■□□□□ 0.4
SHANK1-203ENST00000391813 H3BQ15 152 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 TIMM8AO60220 97 aaPredicted RBP17.53■□□□□ 0.4
SHANK1-203ENST00000391813 CDC14BO60729 498 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 NEIL1Q96FI4 390 aaPredicted RBP17.53■□□□□ 0.4
SHANK1-203ENST00000391813 CALHM2Q9HA72 323 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 FRRS1LQ9P0K9 344 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 HNF1AP20823 631 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 OR10J1P30954 320 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 FBXL14Q8N1E6 418 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 OR4C3Q8NH37 302 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 CCL4L1Q8NHW4 92 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 ZNF391Q9UJN7 358 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 KIF13BQ9NQT8 1826 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 GPR37O15354 613 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 CCL11P51671 97 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 CT45A10P0DMU9 189 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 WDR73Q6P4I2 378 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 LINC00696Q6ZRV3 163 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 CARFQ8N187 725 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 CISD2Q8N5K1 135 aaKnown RBP17.53■□□□□ 0.4
SHANK1-203ENST00000391813 AMER3Q8N944 861 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 NOXO1Q8NFA2 376 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 PLXNB2O15031 1838 aa17.53■□□□□ 0.4
SHANK1-203ENST00000391813 A0A1W2PNR3 127 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 TNFSF15O95150 251 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 OR5AC1P0C628 307 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 ZNF141Q15928 474 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 PLAC9Q5JTB6 97 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 EXTL1Q92935 676 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 IL22RA2Q969J5 263 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 POM121Q96HA1 1249 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 FAM234AQ9H0X4 552 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 C3orf85A0A1B0GTC6 90 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 DVL1O14640 695 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 GAPDHP04406 335 aaKnown RBP17.52■□□□□ 0.4
SHANK1-203ENST00000391813 TMEM92Q6UXU6 159 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 OR11L1Q8NGX0 322 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 TAAR6Q96RI8 345 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 TPPP3Q9BW30 176 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 ADAM20O43506 726 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 USF1P22415 310 aaPredicted RBP17.52■□□□□ 0.4
SHANK1-203ENST00000391813 SULT1A2P50226 295 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 ZNF154Q13106 437 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 MRPS24Q96EL2 167 aaKnown RBP17.52■□□□□ 0.4
SHANK1-203ENST00000391813 TSPAN32Q96QS1 320 aa17.52■□□□□ 0.4
SHANK1-203ENST00000391813 ASCL1P50553 236 aa17.52■□□□□ 0.39
SHANK1-203ENST00000391813 SPEM2Q0P670 501 aa17.52■□□□□ 0.39
SHANK1-203ENST00000391813 MOB1BQ7L9L4 216 aa17.52■□□□□ 0.39
SHANK1-203ENST00000391813 NPEPL1Q8NDH3 523 aa17.52■□□□□ 0.39
SHANK1-203ENST00000391813 HIF1ANQ9NWT6 349 aa17.52■□□□□ 0.39
SHANK1-203ENST00000391813 PRSS50Q9UI38 385 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms