RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 DHRS7BQ6IAN0 325 aaPredicted RBP13.22□□□□□ -0.29
CHD4-201ENST00000357008 RNASEKQ6P5S7 137 aaKnown RBP13.22□□□□□ -0.29
CHD4-201ENST00000357008 OR10V1Q8NGI7 309 aa13.22□□□□□ -0.29
CHD4-201ENST00000357008 MCHR2Q969V1 340 aa13.22□□□□□ -0.29
CHD4-201ENST00000357008 CACNG5Q9UF02 275 aa13.22□□□□□ -0.29
CHD4-201ENST00000357008 ADAP1O75689 374 aa13.22□□□□□ -0.29
CHD4-201ENST00000357008 MDH2P40926 338 aaKnown RBP13.22□□□□□ -0.29
CHD4-201ENST00000357008 GNG4P50150 75 aa13.22□□□□□ -0.29
CHD4-201ENST00000357008 ZNF154Q13106 437 aa13.22□□□□□ -0.29
CHD4-201ENST00000357008 VMA21Q3ZAQ7 101 aa13.22□□□□□ -0.29
CHD4-201ENST00000357008 OIT3Q8WWZ8 545 aa13.22□□□□□ -0.29
CHD4-201ENST00000357008 NTMQ9P121 344 aa13.22□□□□□ -0.29
CHD4-201ENST00000357008 LOXL2Q9Y4K0 774 aa13.22□□□□□ -0.29
CHD4-201ENST00000357008 COL22A1Q8NFW1 1626 aaPredicted RBP13.22□□□□□ -0.29
CHD4-201ENST00000357008 H3BMH7 237 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 CDC34P49427 236 aaPredicted RBP13.21□□□□□ -0.29
CHD4-201ENST00000357008 IRF3Q14653 427 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 SMIM6P0DI80 62 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 EID2BQ96D98 161 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 ADAT1Q9BUB4 502 aaKnown RBP13.21□□□□□ -0.29
CHD4-201ENST00000357008 Q9N2K0 584 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 TRBV5-3A0A0A0MS03 114 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 TCRBV16S1A1N1A0A5B0 115 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 CTLA4P16410 223 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 RFC3P40938 356 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 OR11H7Q8NGC8 314 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 NEIL1Q96FI4 390 aaPredicted RBP13.21□□□□□ -0.29
CHD4-201ENST00000357008 ZNF107Q9UII5 783 aaPredicted RBP13.21□□□□□ -0.29
CHD4-201ENST00000357008 SSC5DA1L4H1 1573 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 GYPAP02724 150 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 CHRNA7P36544 502 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 P2RY1P47900 373 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 WDR73Q6P4I2 378 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 OR5M9Q8NGP3 310 aa13.21□□□□□ -0.29
CHD4-201ENST00000357008 OR5H15A6NDH6 313 aa13.21□□□□□ -0.3
CHD4-201ENST00000357008 OR5H1A6NKK0 313 aa13.21□□□□□ -0.3
CHD4-201ENST00000357008 PLPP3O14495 311 aa13.21□□□□□ -0.3
CHD4-201ENST00000357008 LGALSLQ3ZCW2 172 aaPredicted RBP13.21□□□□□ -0.3
CHD4-201ENST00000357008 OR10G4Q8NGN3 311 aa13.21□□□□□ -0.3
CHD4-201ENST00000357008 OR10G9Q8NGN4 311 aa13.21□□□□□ -0.3
CHD4-201ENST00000357008 OR10G7Q8NGN6 311 aa13.21□□□□□ -0.3
CHD4-201ENST00000357008 MBPP02686 304 aaPredicted RBP13.2□□□□□ -0.3
CHD4-201ENST00000357008 RHOBP62745 196 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 LIAT1Q6ZQX7 453 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 OR10AD1Q8NGE0 317 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 RSRP1Q9BUV0 290 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 HYAL3O43820 417 aaPredicted RBP13.2□□□□□ -0.3
CHD4-201ENST00000357008 SPCS3P61009 180 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 RPS4Y2Q8TD47 263 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 ALG14Q96F25 216 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 NAT8Q9UHE5 227 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 TBX21Q9UL17 535 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 MTCH2Q9Y6C9 303 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 FER1L6Q2WGJ9 1857 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 CLEC18BQ6UXF7 455 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 MED19A0JLT2 244 aaPredicted RBP13.2□□□□□ -0.3
CHD4-201ENST00000357008 FFAR1O14842 300 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 SRFP11831 508 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 BSXQ3C1V8 233 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 STUMQ69YW2 141 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 WFDC8Q8IUA0 241 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 AAMDCQ9H7C9 122 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 LRP5O75197 1615 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 AHDC1Q5TGY3 1603 aaPredicted RBP13.2□□□□□ -0.3
CHD4-201ENST00000357008 LRRC3CA6NJW4 275 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 RPEL1Q2QD12 228 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 KISS1RQ969F8 398 aaPredicted RBP13.2□□□□□ -0.3
CHD4-201ENST00000357008 ZPBPQ9BS86 351 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 NRAPQ86VF7 1730 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 METTL12A8MUP2 240 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 TCAPO15273 167 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 HPXP02790 462 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 C19orf57Q0VDD7 668 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 TRAT1Q6PIZ9 186 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 MOGAT1Q96PD6 335 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 TMEM147Q9BVK8 224 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 PECRQ9BY49 303 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 SLC25A22Q9H936 323 aa13.2□□□□□ -0.3
CHD4-201ENST00000357008 FCGR3BO75015 233 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 AMTP48728 403 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 ZIC1Q15915 447 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 FAM78BQ5VT40 261 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 TMEM215Q68D42 235 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 NUFIP2Q7Z417 695 aaKnown RBP13.19□□□□□ -0.3
CHD4-201ENST00000357008 OR2T10Q8NGZ9 312 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 B4DEV8 164 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 M0R143 59 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 BTNL3Q6UXE8 466 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 ETV3LQ6ZN32 361 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 UBALD1Q8TB05 177 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 MOB3AQ96BX8 217 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 ZMIZ1Q9ULJ6 1067 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 ARG1P05089 322 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 FGF2P09038 288 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 ZNF774Q6NX45 483 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 ACSM6Q6P461 480 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 PRSS41Q7RTY9 318 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 SLC25A42Q86VD7 318 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 CBLN2Q8IUK8 224 aa13.19□□□□□ -0.3
CHD4-201ENST00000357008 OR2J3O76001 311 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms