RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 CBR3O75828 277 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 NDUFB8O95169 186 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 CHRM2P08172 466 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 RPS4Y1P22090 263 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 ALDH3B1P43353 468 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 NOVA1P51513 510 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 ZFP36L1Q07352 338 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 FZD2Q14332 565 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 COA6Q5JTJ3 125 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 ZNF66Q6ZN08 573 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 ZNF619Q8N2I2 560 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 GBGT1Q8N5D6 347 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 NECAP1Q8NC96 275 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 LFNGQ8NES3 379 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 NICN1Q9BSH3 213 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 RNF150Q9ULK6 438 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 DHDHQ9UQ10 334 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 STRAPQ9Y3F4 350 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 LAMA1P25391 3075 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 CBY3A6NI87 242 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 CLDN34H7C241 214 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 ALOX5APP20292 161 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 TUBG1P23258 451 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 EMDP50402 254 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 TRMT12Q53H54 448 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 SMRP1Q8NCR6 262 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 HLA-CQ95604 372 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 SLC25A44Q96H78 314 aaPredicted RBP13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 ELOVL3Q9HB03 270 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 NAGKQ9UJ70 344 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 SLC5A6Q9Y289 635 aa13.82□□□□□ -0.2
CTDSP1-201ENST00000273062 TRBV24-1A0A075B6N3 115 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 C20orf202A1L168 122 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 NKX6-3A6NJ46 265 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 BCKDHBP21953 392 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 DCST2Q5T1A1 773 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 C1orf189Q5VU69 101 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 DPY19L2P2Q6ZN68 376 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 CMTM1Q8IZ96 169 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 OIT3Q8WWZ8 545 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 TMEM37Q8WXS4 190 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 MRPL24Q96A35 216 aaKnown RBP13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 OR2A5Q96R48 311 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 TBX15Q96SF7 602 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 ZNF700Q9H0M5 742 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 B9D1Q9UPM9 204 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 COL4A2P08572 1712 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 A0A1B0GU03 582 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 DBIP07108 87 aaKnown RBP13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 UMODP07911 640 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 SELENOTP62341 195 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 RNF44Q7L0R7 432 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 OR13G1Q8NGZ3 307 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 TMEM18Q96B42 140 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 TP53RKQ96S44 253 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 FBRSQ9HAH7 460 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 GLRX2Q9NS18 164 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 STARD5Q9NSY2 213 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 RHBDD3Q9Y3P4 386 aa13.81□□□□□ -0.2
CTDSP1-201ENST00000273062 ZNF705FA8MVS1 300 aaPredicted RBP13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 M0QZ24 198 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 ZNF705DP0CH99 300 aaPredicted RBP13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 ZNF705BP0CI00 300 aaPredicted RBP13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 GZMHP20718 246 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 DRD1P21728 446 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 PTGER4P35408 488 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 VAMP2P63027 116 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 RUNX2Q13950 521 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 MEP1BQ16820 701 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 HAS2Q92819 552 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 MSL2Q9HCI7 577 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 LRFN1Q9P244 771 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 MEMO1Q9Y316 297 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 RNF115Q9Y4L5 304 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 LOC105371242A0A075B767 164 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 BORCS7-ASMTA0A0B4J1R7 106 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 TRBV11-1A0A0K0K1C0 115 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 HCRTR1O43613 425 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 CYB5R3P00387 301 aaPredicted RBP13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 CTSBP07858 339 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 SGPP2Q8IWX5 399 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 NCOR1P1Q9H4R4 102 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 CNTD2Q9H8S5 307 aa13.8□□□□□ -0.2
CTDSP1-201ENST00000273062 IGHV4-34P06331 123 aa13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 IGFBP3P17936 291 aaPredicted RBP13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 ERVS71-1P61550 626 aa13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 RPS15AP62244 130 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 C1orf61Q13536 156 aa13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 RNF144BQ7Z419 303 aa13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 KMT5CQ86Y97 462 aa13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 SLC26A10Q8NG04 563 aa13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 LAMP3Q9UQV4 416 aa13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 CHTOPQ9Y3Y2 248 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 ZNF780BQ9Y6R6 833 aa13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 SEMA4FO95754 770 aa13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 ACAA2P42765 397 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 PDLIM4P50479 330 aa13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 MRPS21P82921 87 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 TMEM123Q8N131 208 aa13.79□□□□□ -0.2
CTDSP1-201ENST00000273062 FAM160A2Q8N612 972 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms