RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 EHFQ9NZC4 300 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 CSAG2Q9Y5P2 127 aa11.81□□□□□ -0.52
NEK3-205ENST00000610828 RFPL4AA6NLU0 287 aa11.8□□□□□ -0.52
NEK3-205ENST00000610828 CDRT15L2A8MXV6 281 aa11.8□□□□□ -0.52
NEK3-205ENST00000610828 RFPL4AL1F8VTS6 287 aa11.8□□□□□ -0.52
NEK3-205ENST00000610828 CD82P27701 267 aa11.8□□□□□ -0.52
NEK3-205ENST00000610828 FUT6P51993 359 aa11.8□□□□□ -0.52
NEK3-205ENST00000610828 ATP1B3P54709 279 aa11.8□□□□□ -0.52
NEK3-205ENST00000610828 TAS2R31P59538 309 aa11.8□□□□□ -0.52
NEK3-205ENST00000610828 BAMBIQ13145 260 aa11.8□□□□□ -0.52
NEK3-205ENST00000610828 SRSF6Q13247 344 aaKnown RBP11.8□□□□□ -0.52
NEK3-205ENST00000610828 CHRFAM7AQ494W8 412 aa11.8□□□□□ -0.52
NEK3-205ENST00000610828 LRRC37A5PQ49AS3 106 aa11.8□□□□□ -0.52
NEK3-205ENST00000610828 RTL6Q6ICC9 239 aa11.8□□□□□ -0.52
NEK3-205ENST00000610828 SPSB4Q96A44 273 aa11.8□□□□□ -0.52
NEK3-205ENST00000610828 HDHD3Q9BSH5 251 aaPredicted RBP11.8□□□□□ -0.52
NEK3-205ENST00000610828 C5orf66Q9H5L9 145 aa11.8□□□□□ -0.52
NEK3-205ENST00000610828 ZNF552Q9H707 407 aaPredicted RBP11.8□□□□□ -0.52
NEK3-205ENST00000610828 ATPIF1Q9UII2 106 aa11.8□□□□□ -0.52
NEK3-205ENST00000610828 TRAV14DV4A0A0A6YYC5 116 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 TRGV5A0A0B4J1U4 118 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 OR5H14A6NHG9 310 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 NKX2-8O15522 239 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 PI3P19957 117 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 AP2S1P53680 142 aaPredicted RBP11.79□□□□□ -0.52
NEK3-205ENST00000610828 RAB1AP62820 205 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 CAMK2BQ13554 666 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 SIGIRRQ6IA17 410 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 C3P1Q6ZMU1 363 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 TMEM178AQ8NBL3 297 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 OR5AP2Q8NGF4 316 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 OR13G1Q8NGZ3 307 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 PPA2Q9H2U2 334 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 ZNF581Q9P0T4 197 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 GPR132Q9UNW8 380 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 FRYQ5TBA9 3013 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 SPENQ96T58 3664 aaKnown RBP11.79□□□□□ -0.52
NEK3-205ENST00000610828 PRRC2CQ9Y520 2896 aaKnown RBP11.79□□□□□ -0.52
NEK3-205ENST00000610828 IGKV1-12A0A0C4DH73 117 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 ZNF850A8MQ14 1090 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 RP2O75695 350 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 DUS4LO95620 317 aaKnown RBP11.79□□□□□ -0.52
NEK3-205ENST00000610828 IGKV1D-12P01611 117 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 CD8AP01732 235 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 PMP22Q01453 160 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 HLXQ14774 488 aaPredicted RBP11.79□□□□□ -0.52
NEK3-205ENST00000610828 STK11Q15831 433 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 PIGYQ3MUY2 71 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 TMEM128Q5BJH2 165 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 RPUSD3Q6P087 351 aaKnown RBP11.79□□□□□ -0.52
NEK3-205ENST00000610828 COLCA1Q6ZS62 124 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 EMG1Q92979 244 aaKnown RBP11.79□□□□□ -0.52
NEK3-205ENST00000610828 FAAP24Q9BTP7 215 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 COMMD9Q9P000 198 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 SPRR3Q9UBC9 169 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 PRSS50Q9UI38 385 aa11.79□□□□□ -0.52
NEK3-205ENST00000610828 IGKV1D-8A0A087WSZ0 117 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 FIGNL2A6NMB9 653 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 GEMIN2O14893 280 aaKnown RBP11.78□□□□□ -0.52
NEK3-205ENST00000610828 FPR2P25090 351 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 CCL11P51671 97 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 RAB14P61106 215 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 FGL1Q08830 312 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 PDZK1IP1Q13113 114 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 PPA1Q15181 289 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 AADACL3Q5VUY0 350 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 ZNF546Q86UE3 836 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 OR56B2PQ8NGI1 322 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 OR51F2Q8NH61 342 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 WDYHV1Q96HA8 205 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 PAPOLGQ9BWT3 736 aaKnown RBP11.78□□□□□ -0.52
NEK3-205ENST00000610828 MFFQ9GZY8 342 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 GPR160Q9UJ42 338 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 RPS10-NUDT3A0A1W2PQS6 291 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 CEACAM18A8MTB9 384 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 LEUTXA8MZ59 168 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 CA11O75493 328 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 SFTPBP07988 381 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 TNFSF10P50591 281 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 OVCH2Q7RTZ1 564 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 LHFPL1Q86WI0 220 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 FBXL14Q8N1E6 418 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 OSR2Q8N2R0 312 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 PPP1R1CQ8WVI7 109 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 SCGB3A2Q96PL1 93 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 TECTBQ96PL2 329 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 DOCK7Q96N67 2140 aa11.78□□□□□ -0.52
NEK3-205ENST00000610828 SLC22A20A6NK97 555 aa11.77□□□□□ -0.52
NEK3-205ENST00000610828 CDK2AP1O14519 115 aa11.77□□□□□ -0.52
NEK3-205ENST00000610828 RPA2P15927 270 aa11.77□□□□□ -0.52
NEK3-205ENST00000610828 HLA-GP17693 338 aa11.77□□□□□ -0.52
NEK3-205ENST00000610828 ARR3P36575 388 aa11.77□□□□□ -0.52
NEK3-205ENST00000610828 SOX8P57073 446 aa11.77□□□□□ -0.52
NEK3-205ENST00000610828 ARPC4P59998 168 aa11.77□□□□□ -0.52
NEK3-205ENST00000610828 MALLQ13021 153 aa11.77□□□□□ -0.52
NEK3-205ENST00000610828 CLLU1Q5K131 121 aa11.77□□□□□ -0.52
NEK3-205ENST00000610828 ASCL4Q6XD76 172 aa11.77□□□□□ -0.52
NEK3-205ENST00000610828 CALHM1Q8IU99 346 aa11.77□□□□□ -0.52
NEK3-205ENST00000610828 ZSCAN4Q8NAM6 433 aaPredicted RBP11.77□□□□□ -0.52
NEK3-205ENST00000610828 TMEM230Q96A57 120 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms