RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ATP1B3P54709 279 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 MTCP1P56278 107 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 OR10A3P58181 314 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 GNG3P63215 75 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 MZT1Q08AG7 82 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 KISS1Q15726 138 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 SWI5Q1ZZU3 235 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 DMRTC1Q5HYR2 192 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 C1orf100Q5SVJ3 147 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 SFXN4Q6P4A7 337 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 CCBE1Q6UXH8 406 aaPredicted RBP10.98□□□□□ -0.65
SPG7-209ENST00000564047 GDPD3Q7L5L3 318 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 ZNF611Q8N823 705 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 TRMT10AQ8TBZ6 339 aaKnown RBP10.98□□□□□ -0.65
SPG7-209ENST00000564047 NPRL2Q8WTW4 380 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 DVL3Q92997 716 aaPredicted RBP10.98□□□□□ -0.65
SPG7-209ENST00000564047 RNF170Q96K19 258 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 DIRC2Q96SL1 478 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 UQCC2Q9BRT2 126 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 FGF23Q9GZV9 251 aaPredicted RBP10.98□□□□□ -0.65
SPG7-209ENST00000564047 CXXC4Q9H2H0 198 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 C14orf119Q9NWQ9 140 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 ZDHHC8Q9ULC8 765 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 TBC1D24Q9ULP9 559 aa10.98□□□□□ -0.65
SPG7-209ENST00000564047 FAM230AA0A1W2PPH8 454 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 SMIM30A4D0T7 59 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 TMEM210A6NLX4 147 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 IFITM5A6NNB3 132 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 ZNF732B4DXR9 585 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 H0YL77 283 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 AIPO00170 330 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 NCR1O76036 304 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 SSTR2P30874 369 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 THBS2P35442 1172 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 CAV3P56539 151 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 SNRPD2P62316 118 aaKnown RBP10.97□□□□□ -0.65
SPG7-209ENST00000564047 FAM76BQ5HYJ3 339 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 AGAP6Q5VW22 663 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 FAM166AQ6J272 317 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 JAGN1Q8N5M9 183 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 OR2Z1Q8NG97 314 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 OR10AD1Q8NGE0 317 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 OR6M1Q8NGM8 313 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 GTF3AQ92664 365 aaKnown RBP10.97□□□□□ -0.65
SPG7-209ENST00000564047 SORCS2Q96PQ0 1159 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 MS4A5Q9H3V2 200 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 CBLN4Q9NTU7 201 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 NKIRAS2Q9NYR9 191 aa10.97□□□□□ -0.65
SPG7-209ENST00000564047 IGKV1-27A0A075B6S5 117 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 C17orf100A8MU93 164 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 SLC17A2O00624 439 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 SPRY3O43610 288 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 IGHV1-46P01743 117 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 CD55P08174 381 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 DANCRP0C864 163 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 NAT2P11245 290 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 SPNP16150 400 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 CD200P41217 278 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 GPM6AP51674 278 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 BAK1Q16611 211 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 CNIH2Q6PI25 160 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 CRIP3Q6Q6R5 217 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 CDH24Q86UP0 819 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 DTX2Q86UW9 622 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 LRRC28Q86X40 367 aaPredicted RBP10.96□□□□□ -0.65
SPG7-209ENST00000564047 ZNF573Q86YE8 665 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 CELF2-AS1Q8N7Q2 184 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 PNLDC1Q8NA58 520 aaKnown RBP10.96□□□□□ -0.65
SPG7-209ENST00000564047 C14orf79Q96F83 325 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 ELMOD3Q96FG2 381 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 SPACA5Q96QH8 159 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 GPER1Q99527 375 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 MRI1Q9BV20 369 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 CLEC4MQ9H2X3 399 aaPredicted RBP10.96□□□□□ -0.65
SPG7-209ENST00000564047 CNTD2Q9H8S5 307 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 DYNLRB1Q9NP97 96 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 STEAP1Q9UHE8 339 aa10.96□□□□□ -0.65
SPG7-209ENST00000564047 CADP27708 2225 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 LOC100289279A0A1B0GTE1 492 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 A0A1W2PQ09 198 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 LRP5LA4QPB2 252 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 F5H5P2 479 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 PTBP3O95758 552 aaKnown RBP10.95□□□□□ -0.66
SPG7-209ENST00000564047 CSF3P09919 207 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 TNFSF4P23510 183 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 HTR2CP28335 458 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 SRP9P49458 86 aaKnown RBP10.95□□□□□ -0.66
SPG7-209ENST00000564047 PPOXP50336 477 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 ZP1P60852 638 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 MAB21L1Q13394 359 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 RAB11BQ15907 218 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 PCGF3Q3KNV8 242 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 PYDC2Q56P42 97 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 FAM209AQ5JX71 171 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 IDNKQ5T6J7 187 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 HES5Q5TA89 166 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 C11orf71Q6IPW1 123 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 RNF144BQ7Z419 303 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 WDR86Q86TI4 376 aa10.95□□□□□ -0.66
SPG7-209ENST00000564047 ZNF295-AS1Q8N0V1 137 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms