RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 ZNF85Q03923 595 aa14.02□□□□□ -0.17
SQLE-205ENST00000521232 OCLNQ16625 522 aa14.02□□□□□ -0.17
SQLE-205ENST00000521232 ACP7Q6ZNF0 438 aa14.02□□□□□ -0.17
SQLE-205ENST00000521232 ZNRF1Q8ND25 227 aa14.02□□□□□ -0.17
SQLE-205ENST00000521232 CCDC54Q8NEL0 328 aa14.02□□□□□ -0.17
SQLE-205ENST00000521232 H1FXQ92522 213 aaKnown RBP14.02□□□□□ -0.17
SQLE-205ENST00000521232 IMPAD1Q9NX62 359 aa14.02□□□□□ -0.17
SQLE-205ENST00000521232 J3QRE1 110 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 SYT7O43581 403 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 SYNGR1O43759 233 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 NDUFB7P17568 137 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 MPZP25189 248 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 ODF4Q2M2E3 257 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 ZIK1Q3SY52 487 aaPredicted RBP14.01□□□□□ -0.17
SQLE-205ENST00000521232 MEDAGQ5VYS4 303 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 PRSS35Q8N3Z0 413 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 PIP4P2Q8N4L2 257 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 CBR4Q8N4T8 237 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 NPRL2Q8WTW4 380 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 TNFRSF14Q92956 283 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 RNF166Q96A37 237 aaPredicted RBP14.01□□□□□ -0.17
SQLE-205ENST00000521232 ZNF488Q96MN9 340 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 POLDIP2Q9Y2S7 368 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 PCDHGB1Q9Y5G3 927 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 POMT1Q9Y6A1 747 aa14.01□□□□□ -0.17
SQLE-205ENST00000521232 ANKRD61A6NGH8 418 aa14□□□□□ -0.17
SQLE-205ENST00000521232 RFPL4AA6NLU0 287 aa14□□□□□ -0.17
SQLE-205ENST00000521232 RFPL4AL1F8VTS6 287 aa14□□□□□ -0.17
SQLE-205ENST00000521232 M0R1W7 72 aa14□□□□□ -0.17
SQLE-205ENST00000521232 SMIM21Q3B7S5 101 aa14□□□□□ -0.17
SQLE-205ENST00000521232 TP53I3Q53FA7 332 aa14□□□□□ -0.17
SQLE-205ENST00000521232 KCTD20Q7Z5Y7 419 aa14□□□□□ -0.17
SQLE-205ENST00000521232 CALHM1Q8IU99 346 aa14□□□□□ -0.17
SQLE-205ENST00000521232 PDZD9Q8IXQ8 264 aa14□□□□□ -0.17
SQLE-205ENST00000521232 CD177Q8N6Q3 437 aa14□□□□□ -0.17
SQLE-205ENST00000521232 SGMS2Q8NHU3 365 aa14□□□□□ -0.17
SQLE-205ENST00000521232 SSMEM1Q8WWF3 244 aa14□□□□□ -0.17
SQLE-205ENST00000521232 RNFT2Q96EX2 444 aa14□□□□□ -0.17
SQLE-205ENST00000521232 NRIP2Q9BQI9 281 aa14□□□□□ -0.17
SQLE-205ENST00000521232 ADI1Q9BV57 179 aa14□□□□□ -0.17
SQLE-205ENST00000521232 PKIBQ9C010 78 aa14□□□□□ -0.17
SQLE-205ENST00000521232 UNKLQ9H9P5 680 aaKnown RBP14□□□□□ -0.17
SQLE-205ENST00000521232 HES4Q9HCC6 221 aa14□□□□□ -0.17
SQLE-205ENST00000521232 SIRT7Q9NRC8 400 aa14□□□□□ -0.17
SQLE-205ENST00000521232 MGAM2Q2M2H8 2515 aa14□□□□□ -0.17
SQLE-205ENST00000521232 TRBV23-1A0A0A0MS06 115 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 A0A0U1RQK1 487 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 FAM181BA6NEQ2 426 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 POM121CA8CG34 1229 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 RNASEK-C17orf49H0YIS7 233 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 EBAG9O00559 213 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 PRDX2P32119 198 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 ERVK11-1P61568 191 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 ACTC1P68032 377 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 ACTA1P68133 377 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 GUCA2AQ02747 115 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 IL24Q13007 206 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 UBE2V2Q15819 145 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 ANGPTL5Q86XS5 388 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 LDLRAD3Q86YD5 345 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 TMEM185AQ8NFB2 350 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 TBC1D15Q8TC07 691 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 TAF15Q92804 592 aaKnown RBP eCLIP13.99□□□□□ -0.17
SQLE-205ENST00000521232 C10orf35Q96D05 121 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 MBOAT4Q96T53 435 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 CHIAQ9BZP6 476 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 PLEKHA1Q9HB21 404 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 S100A14Q9HCY8 104 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 GNG8Q9UK08 70 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 SLC7A11Q9UPY5 501 aa13.99□□□□□ -0.17
SQLE-205ENST00000521232 EXOGQ9Y2C4 368 aaKnown RBP13.99□□□□□ -0.17
SQLE-205ENST00000521232 A0A1W2PQ09 198 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 SNTNA6NMZ2 147 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 NXPH2O95156 264 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 UBCP0CG48 685 aaKnown RBP13.98□□□□□ -0.17
SQLE-205ENST00000521232 GABRB1P18505 474 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 KIR3DL2P43630 455 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 IER3P46695 156 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 FUT6P51993 359 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 FDX2Q6P4F2 183 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 FIP1L1Q6UN15 594 aaKnown RBP13.98□□□□□ -0.17
SQLE-205ENST00000521232 SHISA2Q6UWI4 295 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 FAM220AQ7Z4H9 259 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 ZNF561Q8N587 486 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 OR2G2Q8NGZ5 317 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 SLC29A1Q99808 456 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 C9orf16Q9BUW7 83 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 CHST5Q9GZS9 411 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 METTL8Q9H825 291 aaKnown RBP13.98□□□□□ -0.17
SQLE-205ENST00000521232 ELL3Q9HB65 397 aaPredicted RBP13.98□□□□□ -0.17
SQLE-205ENST00000521232 TNFRSF19Q9NS68 423 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 MMP24Q9Y5R2 645 aa13.98□□□□□ -0.17
SQLE-205ENST00000521232 FAM230AA0A1W2PPH8 454 aa13.97□□□□□ -0.17
SQLE-205ENST00000521232 DAPL1A0PJW8 107 aa13.97□□□□□ -0.17
SQLE-205ENST00000521232 H3BSH0 61 aa13.97□□□□□ -0.17
SQLE-205ENST00000521232 GATBO75879 557 aaKnown RBP13.97□□□□□ -0.17
SQLE-205ENST00000521232 SERPINA3P01011 423 aa13.97□□□□□ -0.17
SQLE-205ENST00000521232 EEF1B2P24534 225 aaKnown RBP13.97□□□□□ -0.17
SQLE-205ENST00000521232 UBE2E1P51965 193 aa13.97□□□□□ -0.17
SQLE-205ENST00000521232 DLX1P56177 255 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms