RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 LINC01560Q8TB33 94 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 TMEM171Q8WVE6 324 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 SMIM4Q8WVI0 70 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 TNFAIP8L1Q8WVP5 186 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 HPSE2Q8WWQ2 592 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 PIGCQ92535 297 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 SLC25A38Q96DW6 304 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 SDHCQ99643 169 aaPredicted RBP7.29□□□□□ -1.24
VAPB-206ENST00000520497 NKX3-1Q99801 234 aaPredicted RBP7.29□□□□□ -1.24
VAPB-206ENST00000520497 NUDT16L1Q9BRJ7 211 aaKnown RBP7.29□□□□□ -1.24
VAPB-206ENST00000520497 PAPOLGQ9BWT3 736 aaKnown RBP7.29□□□□□ -1.24
VAPB-206ENST00000520497 TMEM59Q9BXS4 323 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 FGF23Q9GZV9 251 aaPredicted RBP7.29□□□□□ -1.24
VAPB-206ENST00000520497 CNTD2Q9H8S5 307 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 SCPEP1Q9HB40 452 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 GPR173Q9NS66 373 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 MRPL15Q9P015 296 aaKnown RBP7.29□□□□□ -1.24
VAPB-206ENST00000520497 PURGQ9UJV8 347 aaKnown RBP7.29□□□□□ -1.24
VAPB-206ENST00000520497 SPEF1Q9Y4P9 236 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 MPC1Q9Y5U8 109 aa7.29□□□□□ -1.24
VAPB-206ENST00000520497 USP9YO00507 2555 aaPredicted RBP7.28□□□□□ -1.24
VAPB-206ENST00000520497 IGKV1-27A0A075B6S5 117 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 TRAV18A0A075B6X5 111 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.28□□□□□ -1.24
VAPB-206ENST00000520497 PQLC2LA1A4F0 135 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 NAP1L6A6NFF2 107 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 WIPF3A6NGB9 483 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 TUBAL3A6NHL2 446 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 ZNF850A8MQ14 1090 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 SHISA9B4DS77 424 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 H3BUI4 141 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 LDLRAD4O15165 306 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 LYRM1O43325 122 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 PFDN1O60925 122 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 RBBP9O75884 186 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 CSTBP04080 98 aaKnown RBP7.28□□□□□ -1.24
VAPB-206ENST00000520497 CSF1P09603 554 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 LOXP28300 417 aaPredicted RBP7.28□□□□□ -1.24
VAPB-206ENST00000520497 PRSS3P35030 304 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 ALDH3B1P43353 468 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 MTCP1P56278 107 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 IFITM3Q01628 133 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 SNTB1Q13884 538 aaKnown RBP7.28□□□□□ -1.24
VAPB-206ENST00000520497 KISS1Q15726 138 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 BAK1Q16611 211 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 CEACAM21Q3KPI0 293 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 BEX5Q5H9J7 111 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 PLET1Q6UQ28 207 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 GLIPR1L1Q6UWM5 242 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 MOB3CQ70IA8 216 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 CDH24Q86UP0 819 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 DMRTC2Q8IXT2 367 aaPredicted RBP7.28□□□□□ -1.24
VAPB-206ENST00000520497 ZDHHC23Q8IYP9 409 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 BHLHE23Q8NDY6 225 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 OR4D6Q8NGJ1 314 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 NPRL2Q8WTW4 380 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 ITPKCQ96DU7 683 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 C1orf147Q96MC9 270 aaPredicted RBP7.28□□□□□ -1.24
VAPB-206ENST00000520497 SPACA5Q96QH8 159 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 METTL9Q9H1A3 318 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 ESRP2Q9H6T0 727 aaKnown RBP7.28□□□□□ -1.24
VAPB-206ENST00000520497 ZNF442Q9H7R0 627 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 ELL3Q9HB65 397 aaPredicted RBP7.28□□□□□ -1.24
VAPB-206ENST00000520497 FAIMQ9NVQ4 179 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 COPZ2Q9P299 210 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 GPR160Q9UJ42 338 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 ING4Q9UNL4 249 aa7.28□□□□□ -1.24
VAPB-206ENST00000520497 KIAA2026Q5HYC2 2103 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 hCG_2014768A0A024R1R8 64 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.27□□□□□ -1.25
VAPB-206ENST00000520497 LINC00854A0A1B0GVQ3 168 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 FAM240BA0A1B0GVZ2 78 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 FAM230AA0A1W2PPH8 454 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 OR5B21A6NL26 309 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 DEFB108AA8MXU0 73 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 CRTAPO75718 401 aaPredicted RBP7.27□□□□□ -1.25
VAPB-206ENST00000520497 IGHV3-13P01766 116 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 TMEM225BP0DP42 221 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 NAT2P11245 290 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 CPT2P23786 658 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 GCH1P30793 250 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 PTGFRP43088 359 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 OR3A4PP47883 348 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 FABP6P51161 128 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 ZP1P60852 638 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 QRFPP83859 136 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 MZT1Q08AG7 82 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 MADCAM1Q13477 382 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 DYRK1AQ13627 763 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 RSU1Q15404 277 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 ADAM5Q6NVV9 412 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 Q6ZR03 302 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 IZUMO1Q8IYV9 350 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 ZSCAN4Q8NAM6 433 aaPredicted RBP7.27□□□□□ -1.25
VAPB-206ENST00000520497 ACBD4Q8NC06 268 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 CHST4Q8NCG5 386 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 OR8G5Q8NG78 346 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 OR5A2Q8NGI9 324 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 OR5P3Q8WZ94 311 aa7.27□□□□□ -1.25
VAPB-206ENST00000520497 DVL3Q92997 716 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms