RNA–Protein interactions for RNA: ENST00000448833.5

VPS41-208, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 1 (best)

Gene VPS41, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-208ENST00000448833 POC1AQ8NBT0 407 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 ZNRF1Q8ND25 227 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 TMEM185AQ8NFB2 350 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 OR2T6Q8NHC8 308 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 OR51E1Q8TCB6 317 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 HPSE2Q8WWQ2 592 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 AQP3Q92482 292 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 TNFRSF14Q92956 283 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 CLPTM1LQ96KA5 538 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 LYZL4Q96KX0 146 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 OR8B4Q96RC9 309 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 MYCBPQ99417 103 aaPredicted RBP5.79□□□□□ -1.48
VPS41-208ENST00000448833 CNN2Q99439 309 aaKnown RBP5.79□□□□□ -1.48
VPS41-208ENST00000448833 SSX3Q99909 188 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 ADI1Q9BV57 179 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 GPR84Q9NQS5 396 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 KRT84Q9NSB2 600 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 FAM206AQ9NX38 181 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 PITPNC1Q9UKF7 332 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 IKZF2Q9UKS7 526 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 SLC7A11Q9UPY5 501 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 MAB21L2Q9Y586 359 aa5.79□□□□□ -1.48
VPS41-208ENST00000448833 TGP01266 2768 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 A0A0G2JK05 382 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 A0A1B0GW55 424 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 TCRBV3S1A0A5B6 114 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 RFPL4AA6NLU0 287 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 ZNF670-ZNF695F2Z2N8 137 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 RFPL4AL1F8VTS6 287 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 G3V2T6 193 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 H3BUX3 64 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 KCNAB3O43448 404 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 ANGPTL7O43827 346 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 RHBDL1O75783 438 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 GATBO75879 557 aaKnown RBP5.78□□□□□ -1.48
VPS41-208ENST00000448833 DNAJC8O75937 253 aaPredicted RBP5.78□□□□□ -1.48
VPS41-208ENST00000448833 CYB5AP00167 134 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 IGLV3-1P01715 115 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 KRT8P05787 483 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 CHRM2P08172 466 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 RPSAP08865 295 aaKnown RBP5.78□□□□□ -1.48
VPS41-208ENST00000448833 CSF1P09603 554 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 OR2T7P0C7T2 308 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 DUX4L2P0CJ85 424 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 DUX4L3P0CJ86 424 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 DUX4L4P0CJ87 422 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 DUX4L5P0CJ88 424 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 DUX4L6P0CJ89 424 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 DUX4L7P0CJ90 424 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 PGA5P0DJD9 388 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 FCGR1AP12314 374 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 AMY2BP19961 511 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 PRKACGP22612 351 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 HAAOP46952 286 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 ERVFRD-1P60508 538 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 EMX1Q04741 257 aaPredicted RBP5.78□□□□□ -1.48
VPS41-208ENST00000448833 IL24Q13007 206 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 TMED1Q13445 227 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 LRRC75BQ2VPJ9 315 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 CEP78Q5JTW2 689 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 BCL2L15Q5TBC7 163 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 TMEM236Q5W0B7 351 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 SLC35E4Q6ICL7 350 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 FAHD1Q6P587 224 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 DUX4L9Q6RFH8 374 aaPredicted RBP5.78□□□□□ -1.48
VPS41-208ENST00000448833 ZNF322Q6U7Q0 402 aaPredicted RBP5.78□□□□□ -1.48
VPS41-208ENST00000448833 ACP7Q6ZNF0 438 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 ZBTB49Q6ZSB9 765 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 TMEM179BQ7Z7N9 219 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 ZDHHC13Q8IUH4 622 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 Q8IYB0 196 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 ENTHD1Q8IYW4 607 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 ELMOD2Q8IZ81 293 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 FAM185AQ8N0U4 392 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 OR13D1Q8NGV5 346 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 OR2T27Q8NH04 317 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 RFKQ969G6 155 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 FOXRED1Q96CU9 486 aaPredicted RBP5.78□□□□□ -1.48
VPS41-208ENST00000448833 C10orf35Q96D05 121 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 SEH1LQ96EE3 360 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 MALSU1Q96EH3 234 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 OSBPL10Q9BXB5 764 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 PKIBQ9C010 78 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 NPFFR1Q9GZQ6 430 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 PPA2Q9H2U2 334 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 PPP1R3EQ9H7J1 279 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 PLEKHA1Q9HB21 404 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 CLN6Q9NWW5 311 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 DUX4Q9UBX2 424 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 GLS2Q9UI32 602 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 GTF2A1LQ9UNN4 478 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 POMPQ9Y244 141 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 R4GMQ9 66 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 WNK1Q9H4A3 2382 aa5.78□□□□□ -1.48
VPS41-208ENST00000448833 A0A1W2PRD5 423 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 A0A1W2PRF3 423 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 A0A1W2PRM7 423 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 SULT1C4O75897 302 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 ATP5HO75947 161 aa5.77□□□□□ -1.49
VPS41-208ENST00000448833 TTRP02766 147 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms