RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 DUXBA0A1W2PPF3 345 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 FRG2CA6NGY1 282 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 IDSB3KWA1 339 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 ADAP1O75689 374 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 PMP22Q01453 160 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 FAM53BQ14153 422 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 C9orf135Q5VTT2 229 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 ZNF660Q6AZW8 331 aaPredicted RBP17.6■□□□□ 0.41
SHANK1-203ENST00000391813 OR51B4Q9Y5P0 310 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 KLRC4-KLRK1H3BQV0 150 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 CHEK1O14757 476 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 LY86O95711 162 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 SUMO3P55854 103 aaPredicted RBP17.6■□□□□ 0.41
SHANK1-203ENST00000391813 LTC4SQ16873 150 aa17.6■□□□□ 0.41
SHANK1-203ENST00000391813 MAP1LC3B2A6NCE7 125 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 OR10A7Q8NGE5 316 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 MAP1LC3BQ9GZQ8 125 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 OR5H15A6NDH6 313 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 OR5H1A6NKK0 313 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 SEC11BP0C7V7 166 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 FUT3P21217 361 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 TFF2Q03403 129 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 TRA2AQ13595 282 aaKnown RBP eCLIP17.59■□□□□ 0.41
SHANK1-203ENST00000391813 FZD2Q14332 565 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 ISXQ2M1V0 245 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 CD200R1LQ6Q8B3 271 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 RPS4Y2Q8TD47 263 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 MRGPRX4Q96LA9 322 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 NOL4LQ96MY1 436 aaPredicted RBP17.59■□□□□ 0.41
SHANK1-203ENST00000391813 H3BP45 60 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 MEGF10Q96KG7 1140 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 MPTX1A8MV57 137 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 PIAS2O75928 621 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 ZIC2O95409 532 aaPredicted RBP17.59■□□□□ 0.41
SHANK1-203ENST00000391813 MBPP02686 304 aaPredicted RBP17.59■□□□□ 0.41
SHANK1-203ENST00000391813 P2RY1P47900 373 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 C11orf40Q8WZ69 217 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 EID2BQ96D98 161 aa17.59■□□□□ 0.41
SHANK1-203ENST00000391813 DNAJB12Q9NXW2 375 aaKnown RBP17.59■□□□□ 0.41
SHANK1-203ENST00000391813 FAM74A7A6NL05 159 aa17.58■□□□□ 0.41
SHANK1-203ENST00000391813 CD1AP06126 327 aa17.58■□□□□ 0.41
SHANK1-203ENST00000391813 CTSDP07339 412 aaPredicted RBP17.58■□□□□ 0.41
SHANK1-203ENST00000391813 HOXC4P09017 264 aaPredicted RBP17.58■□□□□ 0.41
SHANK1-203ENST00000391813 DAOP14920 347 aa17.58■□□□□ 0.41
SHANK1-203ENST00000391813 FAM74A3Q4VXF1 159 aa17.58■□□□□ 0.41
SHANK1-203ENST00000391813 PET117Q6UWS5 81 aa17.58■□□□□ 0.41
SHANK1-203ENST00000391813 CLEC18BQ6UXF7 455 aa17.58■□□□□ 0.41
SHANK1-203ENST00000391813 FAM181AQ8N9Y4 354 aa17.58■□□□□ 0.41
SHANK1-203ENST00000391813 LOXL2Q9Y4K0 774 aa17.58■□□□□ 0.41
SHANK1-203ENST00000391813 CFDP00746 253 aaPredicted RBP17.58■□□□□ 0.4
SHANK1-203ENST00000391813 OR2T10Q8NGZ9 312 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 PPP1R3CQ9UQK1 317 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 GABRA4P48169 554 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 UBE2V2Q15819 145 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 BSXQ3C1V8 233 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 NHLRC3Q5JS37 347 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 ZNF596Q8TC21 504 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 CLCF1Q9UBD9 225 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 MRM2Q9UI43 246 aaKnown RBP17.58■□□□□ 0.4
SHANK1-203ENST00000391813 FAM166BA8MTA8 275 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 HS3ST1O14792 307 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 CLDN15P56746 228 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 MLF1P58340 268 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 ZNF573Q86YE8 665 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 OR4D11Q8NGI4 311 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 RTL8AQ9BWD3 113 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 NAT8Q9UHE5 227 aa17.58■□□□□ 0.4
SHANK1-203ENST00000391813 SLC25A6P12236 298 aa17.57■□□□□ 0.4
SHANK1-203ENST00000391813 ZNF25P17030 456 aaPredicted RBP17.57■□□□□ 0.4
SHANK1-203ENST00000391813 CDKN2AP42771 156 aaKnown RBP17.57■□□□□ 0.4
SHANK1-203ENST00000391813 IL24Q13007 206 aa17.57■□□□□ 0.4
SHANK1-203ENST00000391813 KTI12Q96EK9 354 aaPredicted RBP17.57■□□□□ 0.4
SHANK1-203ENST00000391813 ZFP64Q9NPA5 681 aa17.57■□□□□ 0.4
SHANK1-203ENST00000391813 RPS19BP1Q86WX3 136 aaKnown RBP17.57■□□□□ 0.4
SHANK1-203ENST00000391813 SLC35E1Q96K37 410 aa17.57■□□□□ 0.4
SHANK1-203ENST00000391813 AMDHD2Q9Y303 409 aa17.57■□□□□ 0.4
SHANK1-203ENST00000391813 LOC105371267A0A1B0GV96 52 aa17.57■□□□□ 0.4
SHANK1-203ENST00000391813 ZNF17P17021 662 aa17.57■□□□□ 0.4
SHANK1-203ENST00000391813 FUT6P51993 359 aa17.57■□□□□ 0.4
SHANK1-203ENST00000391813 KCNAB1Q14722 419 aa17.57■□□□□ 0.4
SHANK1-203ENST00000391813 GUCA2BQ16661 112 aa17.57■□□□□ 0.4
SHANK1-203ENST00000391813 MRGPRX3Q96LB0 322 aa17.57■□□□□ 0.4
SHANK1-203ENST00000391813 CASP8AP2Q9UKL3 1982 aa17.57■□□□□ 0.4
SHANK1-203ENST00000391813 RDH5Q92781 318 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 ADGRG7Q96K78 797 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 TRIOBPQ9H2D6 2365 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 A0A1W2PPE2 198 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 KISS1Q15726 138 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 DGAT2L6Q6ZPD8 337 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 ERGIC1Q969X5 290 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 NGBQ9NPG2 151 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 EFSO43281 561 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 SUB1P53999 127 aaKnown RBP eCLIP17.56■□□□□ 0.4
SHANK1-203ENST00000391813 UBE2G2P60604 165 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 OTPQ5XKR4 325 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 SLC25A26Q70HW3 274 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 EPPINO95925 133 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 FAHP16930 419 aa17.56■□□□□ 0.4
SHANK1-203ENST00000391813 ZFP36L2P47974 494 aaKnown RBP17.56■□□□□ 0.4
SHANK1-203ENST00000391813 LAIR2Q6ISS4 152 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms