RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	DOCK7	Q96N67	2140 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	OR4C45	A6NMZ5	311 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	SYT7	O43581	403 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	CNOT4	O95628	575 aa	Known RBP	10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	UBC	P0CG48	685 aa	Known RBP	10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	GAA	P10253	952 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	PPP3CB	P16298	524 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	ADCYAP1	P18509	176 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	SRSF3	P84103	164 aa	Known RBP	10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	CFAP161	Q6P656	301 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	ZNF813	Q6ZN06	617 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	SLC16A14	Q7RTX9	510 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	ZIC4	Q8N9L1	334 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	NEK7	Q8TDX7	302 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	NELFA	Q9H3P2	528 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	PLEKHA1	Q9HB21	404 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	CA10	Q9NS85	328 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	PARPBP	Q9NWS1	579 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	HHLA2	Q9UM44	414 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	STARD10	Q9Y365	291 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.25	□□□□□ -0.77
LMO7-204	ENST00000377499		R4GMQ9	66 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	AKAP13	Q12802	2813 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	PLSCR5	A0PG75	271 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	SNRNP70	P08621	437 aa	Known RBP	10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	PAX6	P26367	422 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	KIR3DL2	P43630	455 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	PPP3R1	P63098	170 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	ZNF660	Q6AZW8	331 aa	Predicted RBP	10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	TPRA1	Q86W33	373 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	GCNT2	Q8N0V5	402 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	JAGN1	Q8N5M9	183 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	CNEP1R1	Q8N9A8	125 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	GJC3	Q8NFK1	279 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	C22orf15	Q8WYQ4	148 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	TRIB1	Q96RU8	372 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	ZNF471	Q9BX82	626 aa	Predicted RBP	10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	PPP1R3E	Q9H7J1	279 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	LHFPL6	Q9Y693	200 aa		10.25	□□□□□ -0.77
LMO7-204	ENST00000377499	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	LOC102725191	A0A1B0GVB3	256 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	ZNF432	O94892	652 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	ABHD16A	O95870	558 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	CLDN18	P56856	261 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	DYRK1A	Q13627	763 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	ACTBL2	Q562R1	376 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	ZNF684	Q5T5D7	378 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	PGAP1	Q75T13	922 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	FGD2	Q7Z6J4	655 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	DERL3	Q96Q80	235 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	ATF6B	Q99941	703 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	SLC25A32	Q9H2D1	315 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	MED9	Q9NWA0	146 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	LOC107986453	A0A1B0GWG9	222 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	SLC22A20	A6NK97	555 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	ERCC1	P07992	297 aa	Predicted RBP	10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	SULT1A3	P0DMM9	295 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	SULT1A4	P0DMN0	295 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	ABO	P16442	354 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	CX3CR1	P49238	355 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	SEC61A1	P61619	476 aa	Known RBP	10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	PKIA	P61925	76 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	LSM6	P62312	80 aa	Known RBP	10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	KIAA0141	Q14154	515 aa	Predicted RBP	10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	LRRC37A5P	Q49AS3	106 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	PLA1A	Q53H76	456 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	TSPO2	Q5TGU0	170 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	OR6K3	Q8NGY3	331 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	APH1A	Q96BI3	265 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	MFF	Q9GZY8	342 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	ZNF71	Q9NQZ8	489 aa	Predicted RBP	10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	MKRN2OS	H3BPM6	223 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	ACTL6A	O96019	429 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	ZNF708	P17019	499 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	ZNF20	P17024	532 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	GAL	P22466	123 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	HOXC12	P31275	282 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	SPOCK1	Q08629	439 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	CDNF	Q49AH0	187 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	DMRTC1	Q5HYR2	192 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	ZNF585A	Q6P3V2	769 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	OR51E1	Q8TCB6	317 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	RNF133	Q8WVZ7	376 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	RGP1	Q92546	391 aa	Predicted RBP	10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	FOXB1	Q99853	325 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499		V9GY05	133 aa		10.24	□□□□□ -0.77
LMO7-204	ENST00000377499	ZNF716	A6NP11	495 aa		10.23	□□□□□ -0.77
LMO7-204	ENST00000377499	COLCA2	A8K830	154 aa		10.23	□□□□□ -0.77
LMO7-204	ENST00000377499	CD79A	P11912	226 aa		10.23	□□□□□ -0.77
LMO7-204	ENST00000377499	BDKRB2	P30411	391 aa		10.23	□□□□□ -0.77
LMO7-204	ENST00000377499	RPS11	P62280	158 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
LMO7-204	ENST00000377499	ROM1	Q03395	351 aa		10.23	□□□□□ -0.77
LMO7-204	ENST00000377499	TMEM244	Q5VVB8	128 aa		10.23	□□□□□ -0.77
LMO7-204	ENST00000377499	FGGY	Q96C11	551 aa		10.23	□□□□□ -0.77
LMO7-204	ENST00000377499	ADGRG7	Q96K78	797 aa		10.23	□□□□□ -0.77
LMO7-204	ENST00000377499	ELOVL1	Q9BW60	279 aa		10.23	□□□□□ -0.77
LMO7-204	ENST00000377499	PBOV1	Q9GZY1	135 aa		10.23	□□□□□ -0.77
LMO7-204	ENST00000377499	SLCO5A1	Q9H2Y9	848 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms